| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2224 |
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| Symbol | |
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| ID | 5104285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2129630 |
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| End bp | 2130625 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640508117 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001192286 |
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| Protein GI | 146304970 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000449816 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATAGTTT TAGGTATTGA GTCAACAGCT CACACTTTTG GAGTAGGCGT TGCGCAGGAT
CAAGTTCCCT TTATTCTAGC TAACGAGAGG CACACGTTTG TACCTCAAAC TGGAGGGATG
AAGCCAAGCG AAGCAGCGAG GCATCATACC TTAGTGGCTC ATGAAATTCT AAGAGGAGCG
TTAGATCGAG CAAGAATATC AATTAGGGAC GTGGATGGAA TAGCAGTAGC TCTTGGACCT
GGTATGGGTC CAACTCTTCG TGTTGGAGCC GTGGTAGCAC GCGCCCTCTC CCTTAGATTT
AACAAGAAAC TCGTTCCCGT GAACCATGGA ATAGGTCACA TCGAGATAGG ATATCTCACG
ACTGAGGCTA AGGACCCACT TATCCTCTAC CTATCTGGAG GGAACACTAT AATCACCACA
TATTATAGGA GAAGGTTCAG AATATTTGGT GAGACCCTCG ACATAGCGCT TGGCAATATG
ATGGACACTT TCGTTAGAGA GGTAGGTCTC GCTCCGCCTT ATATAGTGGA TGGTAAACAT
AAGATAGATA TATGCGCTGA GCAAGGCTCC AGTATAATCG ATCTACCATA TACTGTGAAA
GGAGAAGATA TGTCATTCTC TGGGTTACTT ACTGCCGCCC TTAGGGCAGT TAAGAAGCAT
AACCTTCACG ATGTGTGCTT GAGCCTTAGG GAGATCGCAT ATGGCATGCT TTTAGAGGCT
ACAGAGAGAG CACTAGCCCT AACAGAGAAG GGAGAAATCA TGATTGTTGG AGGAGTTGCA
GCTAGTGGAA GCCTGAGGTC AAAGCTCGAA AAGTTGAGCA ATGATTGGGG TGTTGGACTT
AAGGTTGTGC CTACGTCTTT TGCAGGAGAT AACGGTGCCA TGATAGCCTA TGCCGGCTTG
CTGGCCTTGA AGCATGGGGT TCACATAGAC GTGAAAGATT CTACTATTCG ACCACGTTGG
CGCATAGATG AGGTTGATAT TCCATGGAGG GATTAA
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| Protein sequence | MIVLGIESTA HTFGVGVAQD QVPFILANER HTFVPQTGGM KPSEAARHHT LVAHEILRGA
LDRARISIRD VDGIAVALGP GMGPTLRVGA VVARALSLRF NKKLVPVNHG IGHIEIGYLT
TEAKDPLILY LSGGNTIITT YYRRRFRIFG ETLDIALGNM MDTFVREVGL APPYIVDGKH
KIDICAEQGS SIIDLPYTVK GEDMSFSGLL TAALRAVKKH NLHDVCLSLR EIAYGMLLEA
TERALALTEK GEIMIVGGVA ASGSLRSKLE KLSNDWGVGL KVVPTSFAGD NGAMIAYAGL
LALKHGVHID VKDSTIRPRW RIDEVDIPWR D
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