Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2210 |
Symbol | |
ID | 5105430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 2121879 |
End bp | 2122178 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640508103 |
Product | translation initiation factor Sui1 |
Protein accession | YP_001192272 |
Protein GI | 146304956 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000269686 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGACA ATTTGTGTGG AGGACTTCCA CCGGAAGTAT GTGAGCAGTT AAATAAAGAA GAACAGTTTA TTAAGATAAA ACTGGAAAAG AGAAGGTATG GAAAAGAGGT AACTGTTATA GAGGGTTTAG GGGACGATGC TGATCTGAAG AAAATCGCTT CTGAACTTAA GTCTAAACTG GCTGCAGGAG GTACTGTCAA AAATGGACGC ATAGAGATAC AAGGAGATCA TAGGGAAAGG GCGAGAGATC TTCTGGTAAA GTTAGGTTTC CCAGAGTCTA ACATAATGGT AATAGAATAA
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Protein sequence | MADNLCGGLP PEVCEQLNKE EQFIKIKLEK RRYGKEVTVI EGLGDDADLK KIASELKSKL AAGGTVKNGR IEIQGDHRER ARDLLVKLGF PESNIMVIE
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