| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2207 |
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| Symbol | |
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| ID | 5105427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2118331 |
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| End bp | 2119581 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640508100 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001192269 |
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| Protein GI | 146304953 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000444837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATTGGGG CATTCAATCT AAAGAAATAC TTTCCTGTGA GAGGTTCTGC CCTAAAGAGC
CTCTACGTTA AGGCTGTAGA TAATGTCTCC ATAAAAGTAA ACAGGGGTGA GGTCCTAGGA
ATAGTTGGGG AAAGTGGTTC AGGCAAATCG ACCCTGGGAA GATTACTCAT ACGCTTACTA
GAACCGACTG CCGGAGAGAT ACTCTTCGAT GCACCAGAAG AAGAATTGAA AAGATACGAG
GATGCTCTCC TAACTAACGA CGAAAAAACC ATGAAGGAGA TATCTACCCG GTATTCCCTT
CTATCGAAAA AGGGGTCAGA ACTCAGAAAA CTAAGAACAA GAATGAACAT GGTTTTTCAG
GATCCCTATT CGTCAATAGA CCCCAGATAT AGGATTCTTG ACGTGATAAT GGAGCCCATG
ATATCAACCG GATACCTTAA AGGGGAAGAA GCAAGGAGAA AGGTCTATGA CCTTCTAGAG
GAAGTTGGTC TACCTAGAAA CTTTGCCATG AGATACCCGC ACGAACTATC GGGAGGACAA
AGACAAAGAG TTGCTATAGC CCGTGCTCTT GCCACCGATC CTGACCTACT CATTCTTGAT
GAACCCACAA GTGCCTTAGA TGTATCGGTT CAAGCTCAGA TACTGAACCT ACTCAACGAG
TTAAGGAGGA AGAAAAACAT AACCATGGTC CTAATAACGC ATAACATCGC TGTAGTAAGT
TACATGGCAA ATAGGGTTGC AGTCATGTAC TCTGGACGAC TTATGGAGAT TGGGGATAAG
GAGAGCGTAT TAAACAACCC GAAGCACCCT TACACGATGG CACTTATCTC CTCTGTCCCA
AGGCCTGAGC CAGGATCCAC TAGAAAAAGA ATAATTCTGA AGGGAGATCC ACCCAACCTA
ATAAATCCAC CAAGAGGATG CGTCTTTCAC CCTAGATGTC CCATGGCATT TGAGAAGTGT
GGATGGAGCG TCGACGAGAT AATGGAAGAT ATGAACTACC TTCTACAAGG AAAGTATTAT
AACCTGTTTG AGAAGGCTAG CGTCATTATC GAGGGGACTA AGATGTACGT AAGAAACGCA
AATATTGAAC TGCTAAGGAA AGTCATTAAT GAGGAAAAGG ACAAAATAAG ATCTCTTACC
TCTATCGTAG ATGTGACGGA AGACGGAGAA GTGAGGATAT CTGAGTTCGA GGAACCTAAG
CTCTTCAAGG AAAACGATAA CAGGGAAGTA GCTTGCCTCC TTTTCAAGTA G
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| Protein sequence | MIGAFNLKKY FPVRGSALKS LYVKAVDNVS IKVNRGEVLG IVGESGSGKS TLGRLLIRLL
EPTAGEILFD APEEELKRYE DALLTNDEKT MKEISTRYSL LSKKGSELRK LRTRMNMVFQ
DPYSSIDPRY RILDVIMEPM ISTGYLKGEE ARRKVYDLLE EVGLPRNFAM RYPHELSGGQ
RQRVAIARAL ATDPDLLILD EPTSALDVSV QAQILNLLNE LRRKKNITMV LITHNIAVVS
YMANRVAVMY SGRLMEIGDK ESVLNNPKHP YTMALISSVP RPEPGSTRKR IILKGDPPNL
INPPRGCVFH PRCPMAFEKC GWSVDEIMED MNYLLQGKYY NLFEKASVII EGTKMYVRNA
NIELLRKVIN EEKDKIRSLT SIVDVTEDGE VRISEFEEPK LFKENDNREV ACLLFK
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