| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2206 |
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| Symbol | |
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| ID | 5105426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2116973 |
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| End bp | 2118334 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640508099 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001192268 |
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| Protein GI | 146304952 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000504054 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTCAAG TAAAAACTAG GGAAAAGGTA CTAGAGGTCC AGAACCTCAG GTTGAGCTTT
TACACGAGAA GAGGAGTCTA CAAGGCACTG AGGGGGCCTA CCCTTAATCT CTACTCAGGA
GAAGTACTTG GGATTGCAGG TGAAAGCGGA TCTGGTAAAT CCACACTGGG ACTGGCAATA
ATGGGGCTTC TACCGAGAAA CGCTAGGGTA GAGGATGGAA CAGTTCTTCT AGATGGAATG
GACATGATTA AGCCCCTAAG GGACTACGGT TCTCAAGGCT CTAGGTTTAG CGTAAAGAAA
AATGAGAAAA TTATCAAGAG GCTCAACAAG ACACTCCAAA CCGTAAGGGG AAAGAAGATA
TCCATGGTAT TTCAGGAGCC GTTAACAGCA CTTAACCCAG TACTGCCCGT TGGATATCAG
ATAGCTGAAG CCGTTTACTT CCACGATCCA GAAAGGCTAA TCAGAAGGGC ATTGAGCAGG
CAGAAGGTTA CTCATGAGGA ACTTCGTGAG CTCTTGAACG TTCTTAAGGC TCAAGGAGAG
GAGAGATTGC TAGAGGAAAT TGAGAGGAAA GGCTTACAGG GATTAGATGA GCAAATTCTC
TCCATCTGGA GACGCAGGGA TATACATGAA GCCAGAAAAG AGAAAATGAT CCTAAACCTA
GCTAACGTAA AGTTATCCAG GACGGACTTG ATGGGTATCT CCCTTTATCA AAGAAACATG
GGGAAGTTTC CACTAGCGTC TAGGTTCGCA AAAAATGCAC TAATTAGGGA AGGTTACAGA
CTAGCTGTCG AATTGTTAAC ATTTCTAGGT ATACCTCACC CCGAGAAAGT AGTGAGACTA
TATCCTCACG AGTTATCAGG CGGAATGAGA CAGAGGATAG TTATTGCTAT AGCTCTTGCC
AACAACCCGA AAGTCGTGAT AATGGACGAA CCCACAAGCG CCCTAGACGT CACAATACAG
GCTCAGATCT TGGATCTGGT GAAGGATCTG AAATCCGATT TCAATACCTC ATTCATATTT
ATATCCCATG ACCTATCCGT CCTCGCTGAA GTTTCAGACA GAATTGGGAT CATGTATGCT
GGACAAATAG TCGAGATCGG TTCAGCAAAG GAAATCTTCC AGGAGCCTCT TCATCCTTAC
ACTAAGATGC TGATGGAGGC CATACCAACC ATGGATAAGA CTGTCCTGAA AACAGTTCCA
GGCTCAGTCC CAGACATGAG AAATCCACCT CCAGGTTGTG CCTTCTCACC AAGGTGTCCC
TTTGCCATGG AGGAATGCAG GACAAACGAG CCAAGAATGG TGGAGGTAAA TGATGAGCAC
TCCGTGGCGT GTTTCCTTGT GAGGAAGGGT GATAAGAAGT GA
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| Protein sequence | MSQVKTREKV LEVQNLRLSF YTRRGVYKAL RGPTLNLYSG EVLGIAGESG SGKSTLGLAI
MGLLPRNARV EDGTVLLDGM DMIKPLRDYG SQGSRFSVKK NEKIIKRLNK TLQTVRGKKI
SMVFQEPLTA LNPVLPVGYQ IAEAVYFHDP ERLIRRALSR QKVTHEELRE LLNVLKAQGE
ERLLEEIERK GLQGLDEQIL SIWRRRDIHE ARKEKMILNL ANVKLSRTDL MGISLYQRNM
GKFPLASRFA KNALIREGYR LAVELLTFLG IPHPEKVVRL YPHELSGGMR QRIVIAIALA
NNPKVVIMDE PTSALDVTIQ AQILDLVKDL KSDFNTSFIF ISHDLSVLAE VSDRIGIMYA
GQIVEIGSAK EIFQEPLHPY TKMLMEAIPT MDKTVLKTVP GSVPDMRNPP PGCAFSPRCP
FAMEECRTNE PRMVEVNDEH SVACFLVRKG DKK
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