| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2205 |
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| Symbol | |
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| ID | 5105425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2116077 |
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| End bp | 2116973 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640508098 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001192267 |
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| Protein GI | 146304951 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000404116 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAAC AGATCCAAGA GGAAGAGGAG AAGAGATTTT ACAACTTGAA ATTATCATTA
AAGGTCTTCT TTTCCAATAG GACCGCTGTA GCTGGCTTAA TTATCTTCCT AGGTTATGTT
GCTGACGCTC TACTGATGCA GTTTTACCCT GAGATTGTGG GCGTTAGAAA TCCAAATACC
TTGATTTACA ACTTCATTAA TCCTGTTCCC CAACCGCCTT CGGCTAAGTA TCCCCTTGGA
ACAACTTATC CTGGTGTAAA TCTACTGCAG GCAATAATGG AGGCCATAAG GATAGATCTA
GGATTCTCGT TGCTGATTGT GGTTAGCGGT GCATTAATCG GAGCAGTCAT AGGAGTACTA
GCGGCGTACG TGGGAGGGTA CTTGGATGAG GTTCTAATGA GAATCACTGA TATTTTCTTT
AGCGTACCCT TCCTAGTCTT GGCTCTCGCG GTAGGCTTTG TTCTAGGACG CAGTCTAAAC
AGCATGGTAA TAGCACTGAT CATAGTATGG TGGCCCATTT ACGCTAGATA TTCCAGGAGT
CTTACTCTGA GCCTCAGGGA GAGCATGTTC ATTGAGGCTG CTAAGGCGTC AGGTGCCAGT
AACGCTAGAA TTATGTTCAG GCATATCCTT CCCAACACCT TACCACCAAT CCTAGTACAG
ATCTCGTTAG ATCTAGGATC AGTTGTGGGC ATATTCGCCA CTCTCGCGTT TATAGGGTTC
ATCCCAAACG CAAACATACC TGAACTTGGA TACCTGACAA GTTTAGGCCT AAACTACATA
CAATCTGCTC CCTGGACTGT GATATTTCCA GGATTAGCCA TAACCTTATT CGCTCTCTCT
GTGAATCTAA TGGGAGATGG TCTTAGAGAC GTCATAGATC CCAGGAGGAG AAGCTGA
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| Protein sequence | MEKQIQEEEE KRFYNLKLSL KVFFSNRTAV AGLIIFLGYV ADALLMQFYP EIVGVRNPNT
LIYNFINPVP QPPSAKYPLG TTYPGVNLLQ AIMEAIRIDL GFSLLIVVSG ALIGAVIGVL
AAYVGGYLDE VLMRITDIFF SVPFLVLALA VGFVLGRSLN SMVIALIIVW WPIYARYSRS
LTLSLRESMF IEAAKASGAS NARIMFRHIL PNTLPPILVQ ISLDLGSVVG IFATLAFIGF
IPNANIPELG YLTSLGLNYI QSAPWTVIFP GLAITLFALS VNLMGDGLRD VIDPRRRS
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