| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2185 |
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| Symbol | |
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| ID | 5105406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2096903 |
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| End bp | 2098210 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640508079 |
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| Product | transposase |
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| Protein accession | YP_001192248 |
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| Protein GI | 146304932 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0280977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000348884 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGAGGG CCAACATAGT TAAACTAATC GTAGACAAGA AGACGCACGA GAAGCTCAAA
GAACTCGCAA TCGCTACTGC AAAATGCTGG AACGAAGTGA ACTGGTTAAG AATGCAACAG
TTTAAGAAAG GTGAGAGGGT CGATTTCTCT AAAACAGAAA AGGATGTATA CGAGAAGTAC
AAGCAAATAT TAAAGGTTAA CACACAACAA GTTGCTAGGA AGAACGCTGA GGACTGGAGG
AGTTTCTTCT CATTAATCGA GGAGAAGAAG GAGGGTAAAT TGCCAAGATG GTTTAAACCT
AGACCTCCAG GGTACTGGAA GGATAAAATT GGAAAATACA AGCTGATAAT AATCATTAGA
AAAGACCGTT ACGAGGTTAA TGAGGAAAAG AGGATCATCT ATTTGAAGGA CTTCAAACTC
TCTCTGAGTT TTAAGGGAAA GTTGAAGTGG CACGGGGAAC AAGGTAGGCT GGAAATAATT
TATAATGAGG CTAGGAGGAT TTGGTATGCA CATATACCGG TGGAAGTCCA GAACGATGTG
AAAGCTGAAG GCAAACTAAA GGCTTCCATA GACCTAGGGA TAGTAAACTT AGCAACTGTC
TACGTTGAGG ATGGTAGCTG GTATATTTTC AAAGGTGGTA GTGTTCTCTC TCAGTACGAG
TATTATAGCA AAAGGATTAG CATAGTCCAG AAAACCTTGG CTAGGCATAA GCAGAGGAGG
AGTAGGAAGA TGAAATTATT ATATGAGAAA AGGAAGAGGT TTCTGAAGCA CGCCCTTAAC
AGTATGGTAA GGAAGATAAT GGAGGAGTTG AAGAAGAAGG GTGTGAGCAA GCTTATCATA
GGCTATCCTA AAGAGATAAG TAAGGATCAT GGAAACAAAC TCACGGTTAA CTTCTGGAAC
TACGGTTACA TCATTAGACG TTTTGAGGAG GTTGGGGAGG AGTTAGGTAT TGAAGTGGTT
GAGGTGGACG AGGCGTGGAC TTCTAAGTCT TGCTCCCTAT GCGGGGAAGC CCACCATCGT
GGGCGTATTA AGCGTGGTCT CTATAGGTGT CCCCGCATGG GGAAAGTAAT AAACGCAGAC
TTGAATGGTG CGATAAATAT CCTACATATC CCCGAGTCCC TAGGAGCTGG GAGCGGAGGG
CAACTCCCGG TAAGGGATAG GGGTAATGGG CTGAAGGCCC AGCCCGCGGT CTACCGCTGG
TCGAATGGAG TGGGGTGGGT GTCATCACCC ACTAGCTATG AAGTGATGAA AATGAAGGCG
GTAAACCGCA AACCAATGAA TCGCCCTAAG GGAACCCTCG CCCTTTAG
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| Protein sequence | MKRANIVKLI VDKKTHEKLK ELAIATAKCW NEVNWLRMQQ FKKGERVDFS KTEKDVYEKY
KQILKVNTQQ VARKNAEDWR SFFSLIEEKK EGKLPRWFKP RPPGYWKDKI GKYKLIIIIR
KDRYEVNEEK RIIYLKDFKL SLSFKGKLKW HGEQGRLEII YNEARRIWYA HIPVEVQNDV
KAEGKLKASI DLGIVNLATV YVEDGSWYIF KGGSVLSQYE YYSKRISIVQ KTLARHKQRR
SRKMKLLYEK RKRFLKHALN SMVRKIMEEL KKKGVSKLII GYPKEISKDH GNKLTVNFWN
YGYIIRRFEE VGEELGIEVV EVDEAWTSKS CSLCGEAHHR GRIKRGLYRC PRMGKVINAD
LNGAINILHI PESLGAGSGG QLPVRDRGNG LKAQPAVYRW SNGVGWVSSP TSYEVMKMKA
VNRKPMNRPK GTLAL
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