| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2183 |
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| Symbol | |
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| ID | 5105404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2095556 |
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| End bp | 2096134 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640508076 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001192246 |
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| Protein GI | 146304930 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.287047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000258487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATTCTTA GGGTCACTTT AATCAGTCCT ACAGCACCTC CCTTAGACCT TAACCTGGGA
AAAGGGACCC TTACCATTCT CGATATAAAG CAGGAGGGAG AGCTTCAGAG GCTCCTCGTT
GAGGTGAAGG GCGTAGATGA TTTAGGTAAA ATACAGGGAA ACTTCAGTAA GGTCTCTAAA
CTGAAATACC TCGGGACGGT TAAGGTAAGA GGAGTAGTCG AGGAGATATT GTCAAAGTAC
ATCATCGTTA ATGGTGTGAT CAACGGAAAC TCAACTGTTT GGACTGTTAT CTTAAGCGGG
TACCAGGAAC TGAAAAAGCT GTTGCGGGAG CTTCATGAGC ATGGCATCAA CGTAAAGGTG
ATAAAGGTCA CTAAGTATAA GACAGAGGAT ATTCTCACGG CCAGGCAAGA ACAAATACTT
AGGATAGCGC TTGAGGCCGG TTATTACGAG TTTCCTAGGA AGATCACCAT AAGGGCTCTG
GCAGAGAAGC TGGAGTTAAG CGTATCCTCG CTATCTGAGA TCATCAGGAG AGCTGAAAAG
AACGTGATAG TGAACTATTT CGACGAAAAG GGATTGTGA
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| Protein sequence | MILRVTLISP TAPPLDLNLG KGTLTILDIK QEGELQRLLV EVKGVDDLGK IQGNFSKVSK
LKYLGTVKVR GVVEEILSKY IIVNGVINGN STVWTVILSG YQELKKLLRE LHEHGINVKV
IKVTKYKTED ILTARQEQIL RIALEAGYYE FPRKITIRAL AEKLELSVSS LSEIIRRAEK
NVIVNYFDEK GL
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