| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2182 |
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| Symbol | |
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| ID | 5105403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2094585 |
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| End bp | 2095556 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640508075 |
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| Product | L-threonine O-3-phosphate decarboxylase |
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| Protein accession | YP_001192245 |
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| Protein GI | 146304929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.243931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000290112 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACGGAG GCTTGAAATG GGAAAAGGGG AGACCATCGT CAATCAGGGA CTTCAGTGTC
AACCTCAATC CGTTAGGTGT TCCTAGATTC CTTGAGGAAT TAGTTGAGGA TGCGGTGAGG
AACAGGGTTT ACTCCTTCTA CCCAGACGAA TATAGGCAAC TGAAAAGGGT CATTTCAGAC
CTTTATGACG TAGACGAGGA AATGATAGGC GTATTCAATG GAGCTAGCGA GGCCATCTCT
CTTCTCGATC ACGACTTCTT CGTACCAGAA CCCAACTACC AAGAATATCC CAGGGGATCA
GTTTACCTGG CTCACGAGGA CTACGAGTTC AGGTTCACCC TTCAGGGACA AAAGGTAATT
ACTAGTCATC CCAATAATCC AACTGGTGCC TCACTCCCCA GAGAAGAGGT GATCCCATTC
CTACAGGAGG GTAAGACCCT GGTGATTGAC CAGTCTTTCG CTGACATAAG TCCCGTGGAT
TCCTTTGTTG ACTTGGTGAA GGAATTCCCC AACCTACTCT TAATATCCTC CTTCACAAAG
ACCTTCTCGG TTCCTGGATT AAGGATAGGC TTCACCATAG GAAGTAAGAG TAGTCTCCTG
GAGCGTCGAG CCCCTCCCTG GAGGATTAAC GCAATCGCGT ACTATGTATT CTCCAACATG
GATCTCAAAG AGGCGAGAAG CTTCCTAGTT AGATCCCGTG AAGAGGTGAG AAGAAGTTTA
GAGGAGGTTG AGAGAATTCA AGGCCATGGA TTGAAAATAT ATAGATCCCA TGCACCTTAC
GTTCTAGCTG AGGCCACGGT CACCGCAGAG TTACTAAACA AGGAATTACT AAGGCGAGGA
TACTACGTGA GGGATTGCTC AAACTTCGTG GGTTTGAGGC AAAACCATGT TAGATTTTCC
CTAAGACCTG GTTACTCAGA TCTACTCTCA ACCATCCAGG AAATCATCGA GAATCTCAGT
TACATATCCT GA
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| Protein sequence | MHGGLKWEKG RPSSIRDFSV NLNPLGVPRF LEELVEDAVR NRVYSFYPDE YRQLKRVISD
LYDVDEEMIG VFNGASEAIS LLDHDFFVPE PNYQEYPRGS VYLAHEDYEF RFTLQGQKVI
TSHPNNPTGA SLPREEVIPF LQEGKTLVID QSFADISPVD SFVDLVKEFP NLLLISSFTK
TFSVPGLRIG FTIGSKSSLL ERRAPPWRIN AIAYYVFSNM DLKEARSFLV RSREEVRRSL
EEVERIQGHG LKIYRSHAPY VLAEATVTAE LLNKELLRRG YYVRDCSNFV GLRQNHVRFS
LRPGYSDLLS TIQEIIENLS YIS
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