Gene Msed_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2177 
Symbol 
ID5105398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2091127 
End bp2091546 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content39% 
IMG OID640508070 
Productresolvase domain-containing protein 
Protein accessionYP_001192240 
Protein GI146304924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000287507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGAGG ATATTACTGA AAAAGCAAAG AAAATGTATG AGAGCGGGAG ATCCATAAGG 
GAGATAGCCA AGGAGCTTAG CCTAAGTTAC TCCAGAGCCA GAAGAATACT TAAGGATAGT
GGGGTTCAAT TTCGAGGTAA GACACCACCT GAACTGATTC AGCAGGTGAT CGAGTATGGA
AAGCAAGGGT ATAGTGCAAA CAAGATCAGC AAGCTTCTCA AGATGAACTC CAACACTGTT
CTCAGAATAC TGAAGAAGCA TAATCTAGTT AAGACCAAAA GAAAGCTAAC ACAGGACAAG
ATTCAACGTA TCATGGAAAT GTATAAGAAT GGTTCGTCCA TTTACAAGAT AGCAAAGGAA
CTTGATATCT CTACTAACTT GGTAGTATAC TACCTGAAAA AGTTACAGTT GAAAAGCTGA
 
Protein sequence
MQEDITEKAK KMYESGRSIR EIAKELSLSY SRARRILKDS GVQFRGKTPP ELIQQVIEYG 
KQGYSANKIS KLLKMNSNTV LRILKKHNLV KTKRKLTQDK IQRIMEMYKN GSSIYKIAKE
LDISTNLVVY YLKKLQLKS