| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2166 |
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| Symbol | |
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| ID | 5104905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2082658 |
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| End bp | 2083572 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640508059 |
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| Product | hypothetical protein |
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| Protein accession | YP_001192229 |
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| Protein GI | 146304913 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1992] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00217357 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTAGATA CACCACTGTC GCTAATCACG GACATACTAC TACCTAACGT TAGGGGATTA
GTAGCTAAAA GGCTTAGAGC TCAGGGTATG AGCCAGAACA GGATTGCTGT ATTGGTGGGC
GTAACACAAC CGGCGATAAA GCAGTACCTG GACGAGGATG AAGATGATCT CCGCGGGAAG
CTTGGTGAAG CGGGCCTCAG TAACGAGGAA ATTGACTCCC TGGTATCTAA CCTGGTAAGC
CTGGTTTCCA GCGGGAGAAA AGAGGAGGCC TCTCTTTACT TCACCACGTT CGGATTGATG
ATGCTAAGTC AATTGAAACT GTGCAACTTT CACAGACGCG TGAACTCCTC GATTTCCTCG
GACTGCAGAA TCTGTCAGTC TCTCTACAAG GAGGATGAGG AGAGCCAATT ACAGTTAGCC
CTATCCCTTC TAAGGAACGA GAGCGTATCT AAACTGATCC CTGAGATCTT AAGCAATTTA
GCTTACTCCA AGAGGGATGC GAGGGAAATA CTTGACGTGC TAGCCATTCC AGGAAGGATA
GCGGTGATAG GTGGGGTTCC AACCCCGGCA TCCAGACCCA CGTGGGGCGG TAGCAGGCAC
CTTGCCACCA TACTCCTTGA AACTAGAAGG AAATGTGAAA GGTGGAGGTC AGTAATGAAC
ATCAAATATG ACGAGAAAGT GGAGGAGGCC ATATTGAAAT CTGGACTCAG GCTAGTTAAG
GTTGGTCCCT CGGATAGAAG GGACGATCAA TCCATTGCTA ACATGGTAGC CTCCGTCATA
TCCTCCTGCC CTGATGTGGT CGTTCACCTT GGAGGGAACG GGGTTGAGCC GAACTGTTAC
ATTTTCGGGG AGAATCCCTT AGAGGTATCC TCCAAGGTAA ACAAGATAGC TAAGCTTTGT
TGCGAGTCCT CCTAA
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| Protein sequence | MLDTPLSLIT DILLPNVRGL VAKRLRAQGM SQNRIAVLVG VTQPAIKQYL DEDEDDLRGK
LGEAGLSNEE IDSLVSNLVS LVSSGRKEEA SLYFTTFGLM MLSQLKLCNF HRRVNSSISS
DCRICQSLYK EDEESQLQLA LSLLRNESVS KLIPEILSNL AYSKRDAREI LDVLAIPGRI
AVIGGVPTPA SRPTWGGSRH LATILLETRR KCERWRSVMN IKYDEKVEEA ILKSGLRLVK
VGPSDRRDDQ SIANMVASVI SSCPDVVVHL GGNGVEPNCY IFGENPLEVS SKVNKIAKLC
CESS
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