| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2164 |
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| Symbol | |
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| ID | 5104903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2080228 |
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| End bp | 2081976 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640508057 |
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| Product | hypothetical protein |
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| Protein accession | YP_001192227 |
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| Protein GI | 146304911 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000710411 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATTTG AACCAATAGT GGGAAGGCTC AGGGAGGTCA GAGTAACCAC AAGGCCCACG
GCAGATGGAA GAAGTTCCGT AACGTTCAGG AATTTCGTAG TGGAGATGCC ATACTCCAAG
GACCTTAACC TCAACGTGGG AGCCCTTCTC GCGGTGGAGA CCATAAGGAG TAATACCTAC
CTTATCCTTG AGGTCGCTGA CTACGTTCCC GTCCATTATG GAATGATAAA CATGGATGGA
TCGATACCCA AGGAGATAAG GGATCAGGTA ATGGAGGAGG TCTCCAAGAG TTGGAAAGAC
GGGAATAGCA CGGAGATGTG GATAGATGTG TTTGCGTATC CCATAGGATA CATCGCAACC
CCTGAAGGGT TCAAAAAGGG ATATCTTCCA CCTCTTCCAG GCTCTCCAGT TAGGATTCTA
AGCAGGGAGT CATTCAGGGA GTTCGTTTGC GCAAGGAATG GAGTGGAGAT CGGGAAAGTA
ATAGGGGAAG ATATCCCCCT GACCGTGGAT CTTTCGAAGG CTATGGTTTA CCACATGGGA
GTCTTCGCCT TTACTGGGTC GGGCAAGTCT AACCTCACCG CCTCCATAAT AAGGAGAATC
CTCAATAACA CAAACGCCAA GGTTGTGATC TTCGACGTTT CCATGGAGTA TTCAATCCTT
TTGTTGGACC AGCTTCTGGC CCAGAGGGCC GAGATCCTTA CCACGGATAG GTACTCACCC
AATCCCTTAG ATGCTAGCAG GAAGTTCATG AGAACCCACG TAATACCAGA GGAGTTAGAG
AAGTTCAGGG AGAACATTAG GAGGAGAGTT GAGGAACTGT TCACGTCGGG AAAGATAAGA
ACCCTCTATA TCCCTCCAGA GGGCTCAATG GGCTTAACCT TCGAAACCCT CCTGGAGCTG
GTGAAGGATC AGATAGATGA CAAGTACACG GCCTTCGCTC AGAAGCCCCT GTTTAGCCTC
ATGCTCAGGA AGCTTGACAC CTTCATGAGG CAGAACAGAA TTTCCAAGGA CGCTCCTCTA
GACGACTCAA TCCTTTCAAT ACTAGATGAA ATGGAAAATG AGGGTAGAAA CGCTGGTCTG
AAGGAGAACT CATCGCTCTT CTCATTCATA TCATCCTTAA GATCATACAT AAACACAGAG
GTCGAGGAAA GTGAGGAGTA CGACGTCGAG AAGCTAGCAA TAGACATTCT AGATAAAGAT
GAGTCCTCTC CCAGACTTTT CATCCTAGAG CTACAGAATC TGGAGGAATC CAGGGAAGTT
GTGGCGTCTC TGCTCGAGGA GGTTATGTCA AGGAGGAAAA GGTCCTTCAG TACTTCCCCA
ATTCTCTTCG TTTTGGACGA AGCTCAGGAG TTCATTCCAT TTGATACTAG GCAGAGAGAC
AAGAGCGAGC TGTCCAGTAA CGCCGTGGAG AAATTGCTGA GACATGGAAG GAAGTATCAC
CTTCACGCCC TGATCAGCAC CCAGAGGTTG GCTTACCTAA ACACGAACGT TCTTCAGCAA
CTCCACACTT ACTTCATCAG TGTCTTACCC AGGCCCTACG ATAGGCAGTT GGTCTCTGAA
ACCTTTGGGA TAAACGATAC CCTCCTCGAT AGAACCCTTG ATCTTGAGGT TGGACAATGG
CTCCTTGTGA GCTTCAAGGC ATCCTTACCG CACGATGTTC CAGTTTTCTT TACAGCACCC
AACAACCTAG AGGAGGTGAG AAGGGCGCTT GAGGAGAATA GACCAGCTAA TCCTGTCAAT
GGTAAGTGA
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| Protein sequence | MEFEPIVGRL REVRVTTRPT ADGRSSVTFR NFVVEMPYSK DLNLNVGALL AVETIRSNTY
LILEVADYVP VHYGMINMDG SIPKEIRDQV MEEVSKSWKD GNSTEMWIDV FAYPIGYIAT
PEGFKKGYLP PLPGSPVRIL SRESFREFVC ARNGVEIGKV IGEDIPLTVD LSKAMVYHMG
VFAFTGSGKS NLTASIIRRI LNNTNAKVVI FDVSMEYSIL LLDQLLAQRA EILTTDRYSP
NPLDASRKFM RTHVIPEELE KFRENIRRRV EELFTSGKIR TLYIPPEGSM GLTFETLLEL
VKDQIDDKYT AFAQKPLFSL MLRKLDTFMR QNRISKDAPL DDSILSILDE MENEGRNAGL
KENSSLFSFI SSLRSYINTE VEESEEYDVE KLAIDILDKD ESSPRLFILE LQNLEESREV
VASLLEEVMS RRKRSFSTSP ILFVLDEAQE FIPFDTRQRD KSELSSNAVE KLLRHGRKYH
LHALISTQRL AYLNTNVLQQ LHTYFISVLP RPYDRQLVSE TFGINDTLLD RTLDLEVGQW
LLVSFKASLP HDVPVFFTAP NNLEEVRRAL EENRPANPVN GK
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