| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2162 |
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| Symbol | |
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| ID | 5104201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2077742 |
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| End bp | 2078854 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640508054 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001192225 |
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| Protein GI | 146304909 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000505649 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGACCGT TTCTTATTTT CGTAACGTCG TCGTCATTCT TCCTAGGATA CTTTGCGAGG
ATAGCGTGGA GCATCGTGTC CGTGTATTCC ACTCTAAGAC CCACCGAAAT TCAGGATAGT
GTAATATTTT CCCTTTTCTT TCTTGGTTAC GTAATTGTTC AGATCCCATC GGGCATGATA
TCCGACAGGA GACCTAGGGA GGTAGTGATC TTGGCTCTTG TAGGTCTCGC GATCTCCTCC
TTTCTCTCCG GCTTCTCGAC TTCAATCCTT CAGGAATACG TGGCCAGCCT GTTGATGGGT
CTCTCCGCGG GATGGATATA CCCCGTCACC ATAAAGATAT TAGCATCATC CTTTGACAGG
CGAGAGTTAC CTGTGGCAAT AGGCTACTAC AGCCTGGCGT GGCCACTTTC CATTATTCTT
GCAGGCTTAA CCTTACCCTA CCTCTCCATA AACATTGGAT GGAGATACTC ATACTACATG
ATCTCCCTTC TCTGCGTCAT TGTGGCGTTA CTTTACCTGA AGGTGAGGGT TGAAGGGGGA
GGAAATTCAG GAAAGTTTCA GCTAATAAAG GACAGGAACG TTATTGCGGT GAGTATGGCT
GGCTTTTTGT TTTTTCTCTC ATACTGGATA ATAACCCTTT ACGCTTATAA ATACTTCTTG
AAGGTAGGTC TTAACGGATA CGAGGCTGGT ATTGCGTATT CCTTTCTAGC CGTGGCTGGA
ATACCCTCTA CCGTGATTGC CGGTTACTTA ATACGAAGGA TGGGAGTTAG AACTACCTTA
TCAACCTTTG AGGGGTTTTA TGGAGTGTTG ACTATCCTTC TGTCCTTTCT AGTTTCAAGT
GTATCTCTCT TCATTATCTC ATTCCTTATG GGATTCGTGA GATTCGTCAT TACTCCCGCC
AATTCCAGCG CGGTCTCATT GATAGATAAG GGAAGGGCGG GTAGCGTGTC TGGCTTCGCC
AACTTTTTCT GGCAGAGTAG CGGGATCGTG GCTCCATTAC TCGCGTCCCT CGTGGTGATT
CAGCAGGGTT ATCACGTTCT GTGGATAGTA GCGGGGGTCG TAATACTCCT GTCAGCGGTG
CTGTATAGGG TCTTGTTGAG AATAGAGAGG TAG
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| Protein sequence | MRPFLIFVTS SSFFLGYFAR IAWSIVSVYS TLRPTEIQDS VIFSLFFLGY VIVQIPSGMI
SDRRPREVVI LALVGLAISS FLSGFSTSIL QEYVASLLMG LSAGWIYPVT IKILASSFDR
RELPVAIGYY SLAWPLSIIL AGLTLPYLSI NIGWRYSYYM ISLLCVIVAL LYLKVRVEGG
GNSGKFQLIK DRNVIAVSMA GFLFFLSYWI ITLYAYKYFL KVGLNGYEAG IAYSFLAVAG
IPSTVIAGYL IRRMGVRTTL STFEGFYGVL TILLSFLVSS VSLFIISFLM GFVRFVITPA
NSSAVSLIDK GRAGSVSGFA NFFWQSSGIV APLLASLVVI QQGYHVLWIV AGVVILLSAV
LYRVLLRIER
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