Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2157 |
Symbol | |
ID | 5104896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 2072318 |
End bp | 2073349 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640508048 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001192220 |
Protein GI | 146304904 |
COG category | [R] General function prediction only |
COG ID | [COG2108] Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.350893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000485535 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACTCCT TGCTCAAGGG AAATCCTGAG ATAGGACTTT ACAATAGGGA ATTGCCCAGG GGATGCGAAC TCTGTAGAAT GGGCGGTAAG ATGGTTGTGT TCATTTCTGG AGAGTGTGGA GACTCCTGCT ATTACTGTCC CGTTAGCGAG GGAAGGTTTG GTAAGGATTC AGCGTATGCC AATGAGTACA GGGTAAAGGA GTTACAAGAC TTCATTTATG AGTCCTACAG GATGAATGCC CTTGGTGCAG GGATAACTGG TGGAGATCCA CTACTTCACC TGGACAGGGT AGTGGAATTA ATTACGTTAC TCAAGGACGA ATTTGGTAGA TCTTATCACA TACACCTTTA CACCACTGGT AGATACGCCT CAACTGACGC ACTTTTGGAG CTGGCGAAGG CTGGTCTTGA CGAAATAAGG TTCCATCCTG TAAAGGACCA GTACCTTTCA GCAGTGGAGA GGGCACTCAA GGTTGGGATA GATGTGGGAC TGGAACTGCC AGTTATACCC GGAGAGGAGG ATAGGCTATC TAAGCTGATT AATTGGGCTA GGGAAAAGGG CGTGAAGTTC GTTAACCTCA ACGAACTTGA GCTAACCGAG AGAAATTTCC ATAGCCTCAA TTCCAAGGGT TTCAGGATAG GTCATGGGTT AGCCGGTGTA TCTGGGAGTT TCGAGACCTC CATGAAGGTG CTTGAGACAT TTCATGAAGC GAACATATCA CTTCACTACT GTAGTTCGGT ATACAAGGAT GTCGTAGAGA CTAGAACTAG GTTCATCAGA ACCTTGAGAG CTAGCGGTAA ACCCTACGAG GACATCACAG GAGAGGGTAC CTCATTGCGG GCCATAGTCA AGTCATCCGC GGATCTTTCG GATTTCGGGG AAAAGATAGG AGACACGTTT GTGACCAGTC CATCTCTAGT TAACGTCCTT CCCAAGGAAA AGGTTGACGA GATATGGATT GTGGAGGAAC TACCATATGG TCAAAGACTC TCAGAGAAAC TAGTTTATTC TAAATCTAAG AATGGCCAGT AG
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Protein sequence | MNSLLKGNPE IGLYNRELPR GCELCRMGGK MVVFISGECG DSCYYCPVSE GRFGKDSAYA NEYRVKELQD FIYESYRMNA LGAGITGGDP LLHLDRVVEL ITLLKDEFGR SYHIHLYTTG RYASTDALLE LAKAGLDEIR FHPVKDQYLS AVERALKVGI DVGLELPVIP GEEDRLSKLI NWAREKGVKF VNLNELELTE RNFHSLNSKG FRIGHGLAGV SGSFETSMKV LETFHEANIS LHYCSSVYKD VVETRTRFIR TLRASGKPYE DITGEGTSLR AIVKSSADLS DFGEKIGDTF VTSPSLVNVL PKEKVDEIWI VEELPYGQRL SEKLVYSKSK NGQ
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