| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2157 |
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| Symbol | |
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| ID | 5104896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2072318 |
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| End bp | 2073349 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640508048 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001192220 |
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| Protein GI | 146304904 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2108] Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.350893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000485535 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAACTCCT TGCTCAAGGG AAATCCTGAG ATAGGACTTT ACAATAGGGA ATTGCCCAGG
GGATGCGAAC TCTGTAGAAT GGGCGGTAAG ATGGTTGTGT TCATTTCTGG AGAGTGTGGA
GACTCCTGCT ATTACTGTCC CGTTAGCGAG GGAAGGTTTG GTAAGGATTC AGCGTATGCC
AATGAGTACA GGGTAAAGGA GTTACAAGAC TTCATTTATG AGTCCTACAG GATGAATGCC
CTTGGTGCAG GGATAACTGG TGGAGATCCA CTACTTCACC TGGACAGGGT AGTGGAATTA
ATTACGTTAC TCAAGGACGA ATTTGGTAGA TCTTATCACA TACACCTTTA CACCACTGGT
AGATACGCCT CAACTGACGC ACTTTTGGAG CTGGCGAAGG CTGGTCTTGA CGAAATAAGG
TTCCATCCTG TAAAGGACCA GTACCTTTCA GCAGTGGAGA GGGCACTCAA GGTTGGGATA
GATGTGGGAC TGGAACTGCC AGTTATACCC GGAGAGGAGG ATAGGCTATC TAAGCTGATT
AATTGGGCTA GGGAAAAGGG CGTGAAGTTC GTTAACCTCA ACGAACTTGA GCTAACCGAG
AGAAATTTCC ATAGCCTCAA TTCCAAGGGT TTCAGGATAG GTCATGGGTT AGCCGGTGTA
TCTGGGAGTT TCGAGACCTC CATGAAGGTG CTTGAGACAT TTCATGAAGC GAACATATCA
CTTCACTACT GTAGTTCGGT ATACAAGGAT GTCGTAGAGA CTAGAACTAG GTTCATCAGA
ACCTTGAGAG CTAGCGGTAA ACCCTACGAG GACATCACAG GAGAGGGTAC CTCATTGCGG
GCCATAGTCA AGTCATCCGC GGATCTTTCG GATTTCGGGG AAAAGATAGG AGACACGTTT
GTGACCAGTC CATCTCTAGT TAACGTCCTT CCCAAGGAAA AGGTTGACGA GATATGGATT
GTGGAGGAAC TACCATATGG TCAAAGACTC TCAGAGAAAC TAGTTTATTC TAAATCTAAG
AATGGCCAGT AG
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| Protein sequence | MNSLLKGNPE IGLYNRELPR GCELCRMGGK MVVFISGECG DSCYYCPVSE GRFGKDSAYA
NEYRVKELQD FIYESYRMNA LGAGITGGDP LLHLDRVVEL ITLLKDEFGR SYHIHLYTTG
RYASTDALLE LAKAGLDEIR FHPVKDQYLS AVERALKVGI DVGLELPVIP GEEDRLSKLI
NWAREKGVKF VNLNELELTE RNFHSLNSKG FRIGHGLAGV SGSFETSMKV LETFHEANIS
LHYCSSVYKD VVETRTRFIR TLRASGKPYE DITGEGTSLR AIVKSSADLS DFGEKIGDTF
VTSPSLVNVL PKEKVDEIWI VEELPYGQRL SEKLVYSKSK NGQ
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