Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2153 |
Symbol | |
ID | 5104892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2067211 |
End bp | 2068452 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640508044 |
Product | DNA primase |
Protein accession | YP_001192216 |
Protein GI | 146304900 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000561406 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000473756 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACATCGT TGAAATATAT AATAAAACTG ACCTTCGAGG TAGATGGGTC AGTTGATAAG CCTGACGTTA TAGGGGCCAT TTTCGGCCAA ACCGAGAACC TATTCGGTCA GGAATTTGAC CTTAGGGAAT TGCAGGATAA GGGCAGGCTC GGAAGGATCA TCGTGGAGAT AAAGAATAAG GGTGGTAAGG CCGAAGGTTA CATAGAAATC CCATCGAACT TGGATAGAGT GGAAACTGCC CTGATCGCAT CGATGGTTGA GAGCGTCGAG AAAGTAGGCC CCTATAACGC GAAGTTTGAA TTAAAGGAAA TAGAGGATGT AAGGGCGGAG AAGCTGAAGA AGATCATAGA GAGAGCTAAA CAAATACTGA CAACGTGGAC CAGAGAAAAG AACCTAGATA TTAAGGAAGT GATGAACGAG ATAAGCGGGG CAGTAAAGAC AGGCGAGTTG ATAGAATATG GACCAGAGAG ATTGCCGGCT GGACCAGATG TCTATACCGA TCCCAACCTG ATAATAGTGG AGGGGAGAGC AGATATCATT AACCTACTTA GGTACGGTTA CAAGAACACG GTTGCTGTGG AGGGTGCAAG TGGAAAGATT CCACAGTCTG TGGTGGAGCT ATCGAAGAAC AAGAAGATGG TCATAGCGTT CCTTGACGGA GATCACGGCG GTGACATGAT CCTTAAGGAT CTCATTAATG CTAACGTAAA GATCGACTAC GTGGCAAGAG CCCCTGTGGG AAGGGAAGTT GAGGAACTGA CAGGAAAGGA GATAGCTAAA TCCCTGTCTA ACATGATACC GCTATCACAA TACCTGAAGA GACAGCAGGA GTCCATAGCC TCAGTCTCTA GCAGGATAGA GACCGCAAGT GCTAGAGCAG AGGTAGCGGA GCAACAAACA GTCCAGGTAG TTGAACAGCC TAGAAAGGAG ATTGAGATTA AGATACCTGG GAATGTCATG GAGGAAATAA AGAAACTTCC AGGGACTTTG GAGGGTATTA TCTTCGACGA GAACTGGAAT CTCGTTGAGA GGGTCCAAGT TAGGGACATT ATTACTAAAT TAGAGAACCT TACAAATGGG AACGCGTCCT TCATTATCTT CGATGGAGTA ATAACTCAGC GACTTCTAGA ACTAGCCGCC TCAAAGAACG TCAAGCTGAT CATCGGGGTA AGGATAGGAG GTATAAATAA GAAGCCAGAG AACGTTAAGA TACTAACTCT AGCTGACGTT ATCGGTCCCT AA
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Protein sequence | MTSLKYIIKL TFEVDGSVDK PDVIGAIFGQ TENLFGQEFD LRELQDKGRL GRIIVEIKNK GGKAEGYIEI PSNLDRVETA LIASMVESVE KVGPYNAKFE LKEIEDVRAE KLKKIIERAK QILTTWTREK NLDIKEVMNE ISGAVKTGEL IEYGPERLPA GPDVYTDPNL IIVEGRADII NLLRYGYKNT VAVEGASGKI PQSVVELSKN KKMVIAFLDG DHGGDMILKD LINANVKIDY VARAPVGREV EELTGKEIAK SLSNMIPLSQ YLKRQQESIA SVSSRIETAS ARAEVAEQQT VQVVEQPRKE IEIKIPGNVM EEIKKLPGTL EGIIFDENWN LVERVQVRDI ITKLENLTNG NASFIIFDGV ITQRLLELAA SKNVKLIIGV RIGGINKKPE NVKILTLADV IGP
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