| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2148 |
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| Symbol | rps13p |
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| ID | 5104887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2063500 |
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| End bp | 2063997 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640508039 |
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| Product | 30S ribosomal protein S13P |
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| Protein accession | YP_001192211 |
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| Protein GI | 146304895 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03629] archaeal ribosomal protein S13P |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000612517 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000312913 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAAT CGCAGTTTAG GTACATAGTT AGGCTCTTTG GTCAGGACGT AGACGGTACC
ATGAAGGCCC CGTATGGTCT AGCCATGGTG AAGGGGATAG GCTATAACAC CGCAAGGGTT
ATTCTCATGA AGTTGAATAT TGATAAGGAT AAGAGGCTTG GTGAGCTCAC AGACCACGAG
TTAAAGAAGA TAGAGGAGAT GTTGGCTAAC AAGAAGATCG AATCATTGCC AGCATGGATA
TTCAACAGGA GGAAGGATAT AGAGTCTGGC CAAGATTTGC ATTACGTGAC TTCAGATCTT
GTGTTCGTCG TAAGGAACGA TATTGAGAGG GAGAAGAAGC TTAAGAGCTG GCGTGGTGTT
AGGCATTCCC TTGGCCTAAA GGTAAGGGGC CAAAGGACAA GGACTACGGG AAGAACAGGA
ACGACCATAG GAGTTAAAAG GTCTAAAGCA GCACAGCCCT CTGGAGGGCA ACAGTCTCAA
CAACAACAGA AGAAGTAG
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| Protein sequence | MSESQFRYIV RLFGQDVDGT MKAPYGLAMV KGIGYNTARV ILMKLNIDKD KRLGELTDHE
LKKIEEMLAN KKIESLPAWI FNRRKDIESG QDLHYVTSDL VFVVRNDIER EKKLKSWRGV
RHSLGLKVRG QRTRTTGRTG TTIGVKRSKA AQPSGGQQSQ QQQKK
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