| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2147 |
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| Symbol | rps4p |
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| ID | 5104886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2062948 |
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| End bp | 2063490 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640508038 |
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| Product | 30S ribosomal protein S4P |
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| Protein accession | YP_001192210 |
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| Protein GI | 146304894 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000057291 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000326283 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGAGATC CTAGGAAAAG TAGGAGGAAG TGGGAAGGTC CAGGGATGCC CTGGTTATCC
CAGGCATTAA AGTCGGAACA GAAGATTATG GGTGATTACG GCCTCAGGAA CAAGAAGGAG
ATATGGTTAG CCAGGACCAT TGTAACAGGA TACAGGCATA TGGCAAGATC GCTCTTAGCT
CTACCGCCAG CAGAGAGGGC AGTGAGGGAA AAACAGTTGC TAGGCAAGTT GTATAAGCTA
GGTCTCTTAA AGTCAGAACA GTCAACTATA GACGATATCT TGGGCCTAGA AGAGGAGAGC
CTTTTGGAGA GAAGGTTACA GACAATAGTC CATAGAAAGG GGTTAGCCAG AACAATTTAC
CAGGCACGTC AACTTATAGT TCATGGTCAT ATAGCTGTAG GAGGCCGTAA GATAACTTCT
CCAGGGTATA TCGTGAAGAG GGACGAGGAG GACTCGATAG ACTTTTATCC TACGTCCCCC
TTCAAGAACA ATCCGCCAAC AGCAGGTCAA GGTGAGGTAA ATGTCGAGCA AAAGGGAAAT
TAG
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| Protein sequence | MGDPRKSRRK WEGPGMPWLS QALKSEQKIM GDYGLRNKKE IWLARTIVTG YRHMARSLLA
LPPAERAVRE KQLLGKLYKL GLLKSEQSTI DDILGLEEES LLERRLQTIV HRKGLARTIY
QARQLIVHGH IAVGGRKITS PGYIVKRDEE DSIDFYPTSP FKNNPPTAGQ GEVNVEQKGN
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