Gene Msed_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2144 
Symbol 
ID5104883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2061432 
End bp2061785 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content45% 
IMG OID640508035 
Product50S ribosomal protein L18e 
Protein accessionYP_001192207 
Protein GI146304891 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000147154 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000302523 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGAA CCGGGAGTAC CAATATCGAA AAGAGGAAGT TAATTCAATT CCTGAACAAG 
CAAGACAAAC CCCTATGGGA GGCTGTAGCC AAGGAATTGG ATGTTCCCTC TAGGAAGGTT
AGGACCATAA ACCTCTATAA GATAGATAAA TACACCAAGG AAGGGGACAT CGTGGTCGTT
CCTGGGAAAG TTCTGGGGGT AGGTAATATT TCGCATAAGG TTACTGTTTT CGCGCTTGAC
TTCTCCAAGA GTGCGCTAAA CAAGATAAGG AGTGCTGGTG GTAAGGCTCT TCCCCTTTCT
CAGGGGGTTG AGGAGATCAA GGGTAAAGTT AATGTGAGGT TGATGCATGG ATGA
 
Protein sequence
MKRTGSTNIE KRKLIQFLNK QDKPLWEAVA KELDVPSRKV RTINLYKIDK YTKEGDIVVV 
PGKVLGVGNI SHKVTVFALD FSKSALNKIR SAGGKALPLS QGVEEIKGKV NVRLMHG