Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2144 |
Symbol | |
ID | 5104883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 2061432 |
End bp | 2061785 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640508035 |
Product | 50S ribosomal protein L18e |
Protein accession | YP_001192207 |
Protein GI | 146304891 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1727] Ribosomal protein L18E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000147154 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000302523 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAA CCGGGAGTAC CAATATCGAA AAGAGGAAGT TAATTCAATT CCTGAACAAG CAAGACAAAC CCCTATGGGA GGCTGTAGCC AAGGAATTGG ATGTTCCCTC TAGGAAGGTT AGGACCATAA ACCTCTATAA GATAGATAAA TACACCAAGG AAGGGGACAT CGTGGTCGTT CCTGGGAAAG TTCTGGGGGT AGGTAATATT TCGCATAAGG TTACTGTTTT CGCGCTTGAC TTCTCCAAGA GTGCGCTAAA CAAGATAAGG AGTGCTGGTG GTAAGGCTCT TCCCCTTTCT CAGGGGGTTG AGGAGATCAA GGGTAAAGTT AATGTGAGGT TGATGCATGG ATGA
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Protein sequence | MKRTGSTNIE KRKLIQFLNK QDKPLWEAVA KELDVPSRKV RTINLYKIDK YTKEGDIVVV PGKVLGVGNI SHKVTVFALD FSKSALNKIR SAGGKALPLS QGVEEIKGKV NVRLMHG
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