| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2122 |
|---|
| Symbol | |
|---|
| ID | 5104415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 2041490 |
|---|
| End bp | 2042239 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640508011 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001192185 |
|---|
| Protein GI | 146304869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.237751 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTCC TGGAGTTAGC CGATGTGGAT CTTCATTATG AGGTAAATGG TATTGGGAAA
CCATTGGTAA TGATACACCA TTTAGCTGGA GCTACTCAAA GCTGGGAGCT TGTGGTTAAC
GATCTAGCTT CAAAGTTCTG GGTCATAACG TATGACTTGA GGGGACATGG GAAAAGCTCA
GTCCCTCCCT CAAGATACAC AATTTCAGAT CATGCTCAAG ACTTGAAAGC CCTGTTGGAA
TATCTAGGTG TGAAGGATCC AATTGTGGTG GGACACTCCA TAGGTTCACT CATTGCGATA
GAGTATGCCC TAAAGAACCC AGTAAGCAAA CTGGTACTCA TGGGGGCACT GTATAGGGCA
CCAGATCCCA TACCCTACAT GAGGTATATG GACATTGCCA CTAGATTCGG AATGGAGGCC
TTGGCGTTCT ATAGGAGGCT TAATGGGGAG ATTCCTACCA AGATAACGCA GTCCTTCTGG
TTATGGTCTA AATTCCTTCA GCTCTACAGG AACACGTCGG TTGTGGGCTA CATTAACACG
GTAAGGGGAC TTTTGGAGGC CCCGAACTAC GAGTCCGAGA TAGGCAAGCT TGAAGGCCTC
ACCCTAATCT ACGGGAGCGA GGACAGACTT AAGGCAAACA TGGAAGTCTT TAGGAAGGCC
AAGGCTAATT ACTTTGAGAT TCCTGAGACC GGTCATTTTC CAAACTTGGA GACTCCTGGA
GAACTGCTAA GGATTCTGAA CTCTATCTAG
|
|---|
| Protein sequence | MPVLELADVD LHYEVNGIGK PLVMIHHLAG ATQSWELVVN DLASKFWVIT YDLRGHGKSS
VPPSRYTISD HAQDLKALLE YLGVKDPIVV GHSIGSLIAI EYALKNPVSK LVLMGALYRA
PDPIPYMRYM DIATRFGMEA LAFYRRLNGE IPTKITQSFW LWSKFLQLYR NTSVVGYINT
VRGLLEAPNY ESEIGKLEGL TLIYGSEDRL KANMEVFRKA KANYFEIPET GHFPNLETPG
ELLRILNSI
|
|---|
| |