| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2113 |
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| Symbol | |
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| ID | 5104406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2033307 |
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| End bp | 2035928 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640508002 |
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| Product | ATP-dependent helicase |
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| Protein accession | YP_001192176 |
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| Protein GI | 146304860 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.706735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTC TAGCAAAACA GTTCAGTGAC GAAGAAGTCT TTAGGCTCCT AAGACCATAT
GTTGCGGAGT GGTTCAGGGA GAAATATGGA TCCTTTACTC CCCCGCAAAA GGCCTCGATA
CCAACAATAA AGGCAAATCA AAACGTCCTT ATTTCTAGCC CTACTGGTAG CGGGAAAACT
ATGGCGGCAT TTGTGGGCAT TCTTGATTCT CTCCTTGAAC TTGCAGAGAA TAACGCCCTA
GAAGACAAGG TGTATGCCAT ATATATTTCT CCCTTGAGGG CTTTAAACAA TGACATGTAT
AAAAATCTTT TTATTCCACT AGAAGAGATA AAAACTAGAG TAACTTTACC TCAGGAGATA
AGAGTAGCGG TGAGAACTAG CGATACCTCG CCCAACGAGA AGCAAAAAAT GCTCAGAAGG
CCACCCCACA TTCTAATTAC CACGCCAGAA TCATTTGCAA TATCCCTTGT ATCCCCCAAG
TTTAGTCAAA AACTCAGGGA CGTTAAGTGG ATAGTTGTAG ATGAAATCCA CGAGTTGGCT
GGAAGCAAAA GGGGTGCCTA TCTCTCCGGT TTCCTTGAGC TCTTTGAGTC GTTCCTAAGT
AGTGCACCTC CAGTCAGAAT AGGTCTAAGC GCCACAATCT CTCCCCTAGA TGAGGTAGCG
AAATTCCTAG TGGGAGATAG GGATTGCAAG ATAGTGGATG CGAGATTTCT GAAGGGGATG
GACCTAAGGG TAATTTCCCC CGTGAGGGAT CTTATTCACT CCTCAGAGGA GGAGGTGAGC
AGGGGTATAT ATAGAACTAT ATTGGATGAA ATCAAGAAGC ATAGGACTAC CCTTATCTTC
ACTAACACTA GAAGTGCTGC AGAAAGAGTA TCATATAGAA TAAGAAAGAT GGTGGAGGAG
GAGAAACTAT TCGACGCTGA CCTAATCGGT GCCCATCACA GTAGTCTTAG TAGAGATGTC
AGGCTAGAGA TTGAGAACAA ATTGAAGAAC GGAGAGCTAA AGGTTGTTGT ATCGTCAACC
AGCTTGGAGT TAGGAATAGA TATTGGATAT ATTGACCTTG TCCTTCTCCT CAGTAGTCCT
AAGAGTGTGA GCAGGTTACT CCAGAGAATA GGGAGAGCAG GTCATCACAT AAGACAGGTA
AGCAAGGGAA GAGTAATAGT GGTTGACAGG GACGACTTAG TTGAATGTGC CATCTTAACT
AAACTGGCCA GAGAGAAAAA GATAGATAAC GTTCACATAC CCAGAAAGCC CCTCGATGTC
CTGGTTCAGC TAATACTGGC CTCATCCCTA ATGGGTGAAC AGGATATAGA GAAGCTATAC
TCTACAATAA GGAGATCCTA TTCCTTTTCC AACCTAACTA GGGAGGAATT TGATTCCATA
GTTGATTATC TTTTGGGAAA GTTTGGACTT GATAGCAAAA ACGTGTACCC TAAGATAAGG
ATGGGGGATA AGGGAATTAG GCCGAAACGG GGTGGCAGGA TGATCTTCTA CATGAACAGC
GGAACAATTC CAGAGGAATC CCTGATACCT GTTTTCACGG AGGGAAATAA GTACGTAGGA
AACCTCGAAG AGGAGTTCGT GGAAATCCTA TCCCCTGGCG ATATCTTCAT ACTAGGTGGA
AGAACCTACG AGTTCCTTCT TTCCAAGGGG AACAGGGTCA TTGTAAAGCC CGCTGAGGGA
CAGAGGCCTA CAGTCCCGAG CTGGTTTTCG GAAATGTTAC CCCTTGCCAT AGAGTCGGCC
ATGGAAATTG CATCATTTCG AGGAAAGATA GCCCAAATGA TTCGAGACGG TAAGTCTCAG
GACGAGATAG TGACCCATAT AGAGAACTAC CTTGATGTCT CCAAATCGGC TGCCAGGTCT
ATTTATACTT ACATCCTGGA GGAGTACCTA TTCATTGAAG GATATGTGCC TGACGACAAA
AACTTACTTG TTGAGATTTA CGACGATGAG GAGGATAGAA GGAACTTCAT ATTTCACGCT
CTCTTTGGGA GGAGAGCCCT GGACGCGCTT TCAAGAATAA TAGCGTGGAA GCTCGGATCG
GATCTCAACA TGGACGTTAG GACATCCATA ACCGACAATG GCTTCGTTTT AACCATAGGT
GAAAAGAGGG ACTATGACAT TGCCAAGGCC CTAATGGAGA TTAACCCTGA AGATGTGTAC
GACCTCCTAG GAAACATAGT CCTAAGAACG GAGATGGTTA AACGAAGGTT CAGACATACT
GCTGAAAGGT CCCTAATGCT TCTCAAAAGG TATAAGGGGA GAGAGACCAG TATAGACAGA
AGGCAGATTA ATTCTGAAGT CCTGTTAAAC GTAGTGAAGG AGATACCCAA TTTTCCAGTA
CTCAAAGAGA CTCTTAGGGA AATTCTAGAG GATTACATGG ATATCCATAG TGCGAAATGG
ATTCTGGAGA GGATAATTGC GGGAGATATC AGGGTCAAGG TAATAGGACC TAACCCGATA
CCAAGCCCCT TCGCACATCA AATACTAGCC AAGGAGTATA GTGATATAGT ACTGGCCAGC
GACAAGAGAG AGTTCCTAAG AAAGATGCAT GATAAGGTTC TTCAATTCCT TAGGGAGAAG
GGAATCAATG TCGATCTCAG CTACACCACT GTCAGTGAGT AA
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| Protein sequence | MISLAKQFSD EEVFRLLRPY VAEWFREKYG SFTPPQKASI PTIKANQNVL ISSPTGSGKT
MAAFVGILDS LLELAENNAL EDKVYAIYIS PLRALNNDMY KNLFIPLEEI KTRVTLPQEI
RVAVRTSDTS PNEKQKMLRR PPHILITTPE SFAISLVSPK FSQKLRDVKW IVVDEIHELA
GSKRGAYLSG FLELFESFLS SAPPVRIGLS ATISPLDEVA KFLVGDRDCK IVDARFLKGM
DLRVISPVRD LIHSSEEEVS RGIYRTILDE IKKHRTTLIF TNTRSAAERV SYRIRKMVEE
EKLFDADLIG AHHSSLSRDV RLEIENKLKN GELKVVVSST SLELGIDIGY IDLVLLLSSP
KSVSRLLQRI GRAGHHIRQV SKGRVIVVDR DDLVECAILT KLAREKKIDN VHIPRKPLDV
LVQLILASSL MGEQDIEKLY STIRRSYSFS NLTREEFDSI VDYLLGKFGL DSKNVYPKIR
MGDKGIRPKR GGRMIFYMNS GTIPEESLIP VFTEGNKYVG NLEEEFVEIL SPGDIFILGG
RTYEFLLSKG NRVIVKPAEG QRPTVPSWFS EMLPLAIESA MEIASFRGKI AQMIRDGKSQ
DEIVTHIENY LDVSKSAARS IYTYILEEYL FIEGYVPDDK NLLVEIYDDE EDRRNFIFHA
LFGRRALDAL SRIIAWKLGS DLNMDVRTSI TDNGFVLTIG EKRDYDIAKA LMEINPEDVY
DLLGNIVLRT EMVKRRFRHT AERSLMLLKR YKGRETSIDR RQINSEVLLN VVKEIPNFPV
LKETLREILE DYMDIHSAKW ILERIIAGDI RVKVIGPNPI PSPFAHQILA KEYSDIVLAS
DKREFLRKMH DKVLQFLREK GINVDLSYTT VSE
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