Gene Msed_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2108 
Symbol 
ID5104401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2029812 
End bp2030357 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content42% 
IMG OID640507997 
Productprecorrin-6B methylase 2-like protein 
Protein accessionYP_001192171 
Protein GI146304855 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.538853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCAC TCACTGATGA TAGTTTTTTC GAGTCAGATA TTCCTGGGCC AACGAGACAG 
GAAATAAGAG CGGTATCTAT TTCAAAATTG AAAGTCTTTC CAGGATGTAG GGTCCTTGAA
GTCGGAACTG GTACTGGGGC CATCGCAGTT GACCTGGAGA GGTTTGGATG TTACGTTGTC
TCCTTGGATC TCAAGGAGTA CATTTCGAGA TCTCCAGGCA GAAAGCTTGC CAATAACGTG
GATTTTGTCC AGGCTGAATT TCCCTTCTTT TCAACTAGAG AAGTGTTTGA TTCTGTTTTT
ATAGGAGGAA CTCAAAACAT TTGTGGAACC GTGAAACTTG CTCACTCCCT TTTAAGGAAG
GGAGGTAGGA TAGTTATTAA CGCTTTCACG CTGGAGTCCT TAGGAGAAAT CTCCAAAGCC
CTGGAGGAAA ATTTTCATGA GTTCGATGTA ATTCAGATAT TTGTAAGCAA AGCAGAAAGA
CTAGGAAAAT ACAGAGCGTT TATCGCAAGA AATCCAGTAT ATATCTTTTA CGCCTCTAAA
GATTGA
 
Protein sequence
MFPLTDDSFF ESDIPGPTRQ EIRAVSISKL KVFPGCRVLE VGTGTGAIAV DLERFGCYVV 
SLDLKEYISR SPGRKLANNV DFVQAEFPFF STREVFDSVF IGGTQNICGT VKLAHSLLRK
GGRIVINAFT LESLGEISKA LEENFHEFDV IQIFVSKAER LGKYRAFIAR NPVYIFYASK
D