| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2101 |
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| Symbol | |
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| ID | 5104395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2022219 |
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| End bp | 2023367 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507991 |
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| Product | cobalamin biosynthesis protein CbiD |
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| Protein accession | YP_001192165 |
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| Protein GI | 146304849 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
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| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.753139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGTGTAA GAATACCGCT AAACTATCAG CCAAGCTCAC CCTCACTGTC CAACGCTAAA
TCGGCCAAGC GAAAAATCCT CAAGATGGGA TTTACGACTG GAACCGCTCT TGCGGCCGCG
GCTAAGGCTT GTGCCTATGC CATAACTGGA GAGATTAAGA AGGCGGTAGT GGTGTCAACC
CCCATTGGAC TCAGAATAGA GATTCCGCTA AATTACGTAA AAATGGAGGA AGAGTGGTGC
GTAGCCTCAG TAACTAAGTA CGGTGGCGAT GATCCGGATG ACACAAACGG AATGGAAATA
GTGGTAAGAA TGAGATTGAA TGACGACAAG GGATACATAG TGGTGAGGAC AGGTAAGGGG
CTTGGAAAGG CGGTCAGTAA GGGGTTACCT GTGAACCCTG GAGAACCTGC CATAAACCCA
GTCCCTAGGA AACAACTAAT CGACAATCTA AAGGAGGTTC TCGGGGATAA TTTTGGGGCA
GAAATAGAGG TGATAATTCC AGAAGGAGAG AGAATCGCAA GGAGGACCTT CAATCCTAAG
CTTGGGATAG AGGGAGGAGT CTCCATCCTA GGAACCAGTG GGGTGGTGAA GCCTATGAGC
CTCGTGTCCT GGTACGCTTC CCTAGTGGAG CAGTTAGATA TTGTAAAAAC CTATGGGATA
GATCAGGTTG TACTGGTACC AGGGAATATA GGTGAGACCA GCGCCAGGAG AAAGCTCAAC
GTTGATTCCA GGTCAATAGT TCAAATGGCC ATATTCACGG GAGGTATGTT GAAGGCTTCG
GCGAAGAGAG GATTCAAGGA AATTCTGCTC TATGGGCATG TGGGGAAATT AATTAAGAGC
GCCATAGGCA TATGGAACTC CCACTATAAG TATGGGGATG GTAGATTAGA GATAATAACT
GCCTACGCAG CCAAGCACGG GGTTAAACAC GACGATATCC TCAGGCTAAT CAACGCTAAA
ACTACGGATG AAGCTATTGC CATTTTGAAA GACTATGACT ACAAGGAGAT ATTTAATGAA
ATAGCGGATA AGATATCCCT TAACTCCCAT AACCTTATTG AAGGAAAGGC AAAGGTATAC
TGCATTCTAA TAAACATGGA AGGGGAGATA GTTGGATTAT CAACCGGGTC AGAGAAATTC
TTGGCCTAA
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| Protein sequence | MSVRIPLNYQ PSSPSLSNAK SAKRKILKMG FTTGTALAAA AKACAYAITG EIKKAVVVST
PIGLRIEIPL NYVKMEEEWC VASVTKYGGD DPDDTNGMEI VVRMRLNDDK GYIVVRTGKG
LGKAVSKGLP VNPGEPAINP VPRKQLIDNL KEVLGDNFGA EIEVIIPEGE RIARRTFNPK
LGIEGGVSIL GTSGVVKPMS LVSWYASLVE QLDIVKTYGI DQVVLVPGNI GETSARRKLN
VDSRSIVQMA IFTGGMLKAS AKRGFKEILL YGHVGKLIKS AIGIWNSHYK YGDGRLEIIT
AYAAKHGVKH DDILRLINAK TTDEAIAILK DYDYKEIFNE IADKISLNSH NLIEGKAKVY
CILINMEGEI VGLSTGSEKF LA
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