| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2095 |
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| Symbol | |
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| ID | 5104389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2016169 |
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| End bp | 2017740 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507985 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001192159 |
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| Protein GI | 146304843 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.729554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGA AATCCATAGA AATACTTGAC ACGACCCTTA GGGATGGTTC TCAAGCAGCA
ACTATTTCCT TCACCCTAAG GGATAAGATA AAGATAGCCC TTCTCCTAGA TGAGCTAGGA
GTGGACTATA TAGAAGGTGG ATGGCCTGGA TCTAACCCTA AGGATTACGA GTTCTTCAGG
GAGATTAAGA ACTACCACCT TAAGCATTCA AAGATTGCAG CTTTCGGGAG CACTAGAAGG
AAGGATTTAA GGCCAGAGAA CGACCCGAGC CTATCTTCAA TTCTAGAGGC AGACGTCAAG
GTTGCGGTGC TCTTCGGTAA AACATGGACG CTTCACGTCA AGGAAATATT GAGGACCACC
TTGGAAGATA ATCTCTCCAT AATAGCTGAT AGCATCCAAT TCCTGAGGGA TCATGGACTG
GAGGTTATAT TCGATGCTGA ACATTTCTAT CAAGGCTTCA AGGAGGATCC AGATTATGCA
ATAAGGGTAG TTAATACTGC AGGTGAGGCT GGGGCAAGAG TTGTCGCCCT AGCGGATACC
AACGGGGGCA CGCTACCCCA TGAGGTACTA GAAATAACCA GACGAGTGGC CGAAAACACT
AGGGTGAAGC TTGGGGTTCA CATGCACAAT GATTCGGGTA CAGCGGTGGC CAACTCATTG
ATGGGGGTAG TAGGAGGGGC TAGACACGTT CAGGGAACTA TTAACGGAAT TGGTGAGAGA
ACTGGAAATG CTGACCTAAT TCAGATAATA CCCAGCCTCG TTCTAAAAAT GGGGTATAGG
GTACTCAAGA ATGAGGATGG TCTTAAGAAG CTAAAACAGG TGTCCTCCAC ACTCTATGAA
TTGGCAGGAT TACATCCCAA CCCCTTCCAG CCCTATGTGG GAGATAACGC ATTTACCCAT
AAGGCAGGAG TTCACGCCGA TGCGGTAATG AAGAACACCA GAGCATATGA ACATATAGAC
CCGTCCCTAC TGGGCAATCA GAGAAAGGTA GTAATCTCAG AGCTTTCTGG GACGTCAAAC
CTAGTGAATT ACCTTGAGAA ACTGGGAATC AAGGTAGAAA AGAAGGAGGA GAAATTGAAG
AAGGCATTAA AGGCCATCAA GGAGATGGAG GCCCGCGGAT ACAGCTTTGA CCTGGCACCT
GAATCGGCTA TGTTAGTGGC CTTCAAGGAA ATGGGAATAT ATGAAAAGTT CTTCGACGTG
CAGTACTGGA AGGTTATAAA CGAGAACGGA TTAGCCCTTG CCGTAGTCAA GGTTAACTCT
AGAGTTGAAG CTGCTGAGGG TACGGGACCA GTTCACGCAG TGGACGTGGC GCTGAGACGG
TGCCTCTCAA AGGATTTTCC TGAAATAGAG AGAGTTAAAC TCACGGATTA CAGGGTCGTT
CTACCAGGCG AGGTAAAGAA CACGGAGAGC GTAGTACGTG TGACCATCGA GTTTAACGAC
GGAGAAAGGT CTTGGAGGAC TGAAGGTGTC TCAACTAGCG TTATAGAGGC ATCGATAATG
GCACTTGTGG ATGGGCTGGA CTATTATCTT CAACTTAATA AGAAATTAAA GCCTCTAGTT
GCAAAAGAGT AG
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| Protein sequence | MAKKSIEILD TTLRDGSQAA TISFTLRDKI KIALLLDELG VDYIEGGWPG SNPKDYEFFR
EIKNYHLKHS KIAAFGSTRR KDLRPENDPS LSSILEADVK VAVLFGKTWT LHVKEILRTT
LEDNLSIIAD SIQFLRDHGL EVIFDAEHFY QGFKEDPDYA IRVVNTAGEA GARVVALADT
NGGTLPHEVL EITRRVAENT RVKLGVHMHN DSGTAVANSL MGVVGGARHV QGTINGIGER
TGNADLIQII PSLVLKMGYR VLKNEDGLKK LKQVSSTLYE LAGLHPNPFQ PYVGDNAFTH
KAGVHADAVM KNTRAYEHID PSLLGNQRKV VISELSGTSN LVNYLEKLGI KVEKKEEKLK
KALKAIKEME ARGYSFDLAP ESAMLVAFKE MGIYEKFFDV QYWKVINENG LALAVVKVNS
RVEAAEGTGP VHAVDVALRR CLSKDFPEIE RVKLTDYRVV LPGEVKNTES VVRVTIEFND
GERSWRTEGV STSVIEASIM ALVDGLDYYL QLNKKLKPLV AKE
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