Gene Msed_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2091 
Symbol 
ID5104385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2013256 
End bp2014173 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID640507981 
Productcobalamin (vitamin B12) biosynthesis CbiG protein 
Protein accessionYP_001192155 
Protein GI146304839 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATGTAT CTAAGATTAA GATAGTTTCT GATCCCAGTA ACGAGCTGGC TAAAACACTG 
GCCAAAAGAT TAGAGGAGCT TGGATACTAC GTGGTCAATG AGAATCCTGA GATCTACGTG
TTCTTCTATC CCCTGGGAAT TACTGTGAGA AAGATTCTAG GGTTGATAAG GGATAAGGCC
ACTGACCCGG TAGTCATCAG TGTGACAGAT GACGGTAGTT ATGTGATACC CGTCATCAAG
GAACATCGTG GTGGCTCCAT CCTCGGAGGC ATAATTGCAG ATTTGATGGG GTCTCAACTT
GTTCTCACGT CACGTACCTC ACAGATGGGT ATTTACAGCG TAGAGGAATT CGCGTGGATG
AATGGGCTTG AGATAGACCC GAAGGTGGCA GACTCGCTGA ACTTCAAACT TGTTAAGAAC
GGGAAGCTGA GGTTCTTCGT GGAGGATAGG TTAGACCTTA AGGTGGTTGA GGGTTTCGAA
CCCGCGGACA GGTTAGAAAA CGCTGACCTA GTCATAGGTG AAGAGTGCTC GGATCTTCCC
ACCTTAAGGC CCAAGAGACT GGTAATAGGG CTTGGATACT CCACAGGGGT TCCGCTTGAA
GTCCTCTACT TTTCAATAGT TAGCACGATG AAATCGCTTC ATGTGTATGA AAGGAGGTTG
GATTTTATTG CTGTTCCTGA GATAAAGCAG GGAGATGAAA GGATCAAGAA GATAGGTAAC
ATGCTAGGTG CGTCAATTAT CTACGTTCCA CTGGATCAGA TTCGAGGTAG GAGTCAATCT
ACTCCATCCA GGGTTGCCAG GGATAGATTT GGTATTGATG GTGTATGCGA ACCTTCGCTC
GAGGCACTTG GAACTAGAAT TGTTCTTAAA AGAACTAAAA GGGCATATGG AGTAGTTACA
TGCTTGGGGG TTAAATGA
 
Protein sequence
MYVSKIKIVS DPSNELAKTL AKRLEELGYY VVNENPEIYV FFYPLGITVR KILGLIRDKA 
TDPVVISVTD DGSYVIPVIK EHRGGSILGG IIADLMGSQL VLTSRTSQMG IYSVEEFAWM
NGLEIDPKVA DSLNFKLVKN GKLRFFVEDR LDLKVVEGFE PADRLENADL VIGEECSDLP
TLRPKRLVIG LGYSTGVPLE VLYFSIVSTM KSLHVYERRL DFIAVPEIKQ GDERIKKIGN
MLGASIIYVP LDQIRGRSQS TPSRVARDRF GIDGVCEPSL EALGTRIVLK RTKRAYGVVT
CLGVK