| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2086 |
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| Symbol | |
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| ID | 5105066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2004741 |
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| End bp | 2005958 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507976 |
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| Product | citrate transporter |
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| Protein accession | YP_001192150 |
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| Protein GI | 146304834 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.771625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT TAGCGTTTGC TGTTGTTATA GTCACCTACG CACTAATAGC AACTAGGGGA
GTTTCTGGAA TACCCCCTTG GGCCTCCATG TTTTTCGGGG GTGTAATGAT GATAGTGACG
GGTGTTATTA CTCCTCAGGA GGGATTTGCG TCTATCAACC TTGACGTCGT CCTTTTCCTC
ATTACCCTCT TCACCTTCGC CTCTGCCCTG GAGGTTTCAG ACTTTCTAAA ATACTTAGGA
TTTTATATTG TAAATAAGTT CAAGACGCCC TCTAGAACTC TTTTTGGGGT GTTGCTCTTC
TCCGGTTTGC TGTCAAATCT GGTGACCAAT GACGGTGTCT CGGCTAGCTG GACGCCAGTA
ATACTTGAAA GCAGTAAGAA ACTTGGAGTG GATGAGAAAC CATTCCTGTA CGCGCTAGCA
TTTGGAGTTA CAATTGGAAG CGTAATGCTC CCCACCGGAA ACCCACAAAA TCTTCTAATA
GCCCTAGATG CCGGTCTGAA GAATCCCTTC ATCGAGTTTG CGATGATCTT GGTACTGCCC
ACGCTGATCA ACCTTGTCCT ATCGTACCCC ATTTTACTCC TACTATTTAG GAAGGAACTT
AAGAGTGACG GAGAGATTGG CCATTTTCAG GAAAAAATAG AGGACCCTGT CACTGCCTAC
ACATCTCTGG CTCTACTGGG TATTACTGTA GTTTTATTTT TCTCACTTAG TTTTCTCGGA
ATAGACATAG TCCTAGGTTC CCTTACCACT TCGTCTATCC TTATCCTAGT CTCCAAAAGG
AGGAGAGAAA TCATTAGGAG GATGGATTGG TCTACCATTT TGTTCTTCAT AGGATTGTTC
ATGTTTACAG AGGGCATGAT AAAGGGTGGG GTCCTGAGTG CCATAGTCCG CTATCTTCCA
TCCCCGTCGT CCGTCTTTAC CATTATGCTG GTAAGCGTTC TGGTTAGCCA ATTGCTTAGC
AACGTACCCC TGGTCGCAAT ATACATCCCT GTGATGATTT CCTCTGGTGC CACGTCTCCG
CTGGATTGGC TCGCCCTAGC CGCAGGTAGC ACAATAGCTG GCAACTTCAC GTTAATAGGA
GCAGCTAGTA ATGTGATAAT CTCAGAGTCT TCAGAAAGTA GGGGAGGAAA AGGATTTGGA
TTTATAGAGT TTATTAAAAA CTCTGTTCCT CTGTTGATAG TAAATTTTCT AGTTCTCTAC
CTATTTCTTA GGCTGTAG
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| Protein sequence | MNLLAFAVVI VTYALIATRG VSGIPPWASM FFGGVMMIVT GVITPQEGFA SINLDVVLFL
ITLFTFASAL EVSDFLKYLG FYIVNKFKTP SRTLFGVLLF SGLLSNLVTN DGVSASWTPV
ILESSKKLGV DEKPFLYALA FGVTIGSVML PTGNPQNLLI ALDAGLKNPF IEFAMILVLP
TLINLVLSYP ILLLLFRKEL KSDGEIGHFQ EKIEDPVTAY TSLALLGITV VLFFSLSFLG
IDIVLGSLTT SSILILVSKR RREIIRRMDW STILFFIGLF MFTEGMIKGG VLSAIVRYLP
SPSSVFTIML VSVLVSQLLS NVPLVAIYIP VMISSGATSP LDWLALAAGS TIAGNFTLIG
AASNVIISES SESRGGKGFG FIEFIKNSVP LLIVNFLVLY LFLRL
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