Gene Msed_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2076 
Symbol 
ID5105056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1994789 
End bp1995214 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content49% 
IMG OID640507966 
ProductNUDIX hydrolase 
Protein accessionYP_001192140 
Protein GI146304824 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.963545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAC CTTTAGTTGC GGTAGGATCA GTAATTTTCA ACCGGGATAA GGTGCTATTG 
GTGAGGAGAT TACATCCCCC TAACCAGGAT AGGTGGGCCG TTCCAGGGGG TAAGGTAGAA
TTTGGAGAAT CCATAAGGGA GGCAGTAATT AGGGAAACTA TCGAGGAAAC GGGATTGCAG
GTGGAACCAA GGGTCTTGAT GGCTGTCGTT GAGGTGTTTA GGGAGGGCTA TCATTATGTG
ATCCTGGACT TCATCTCTGA GGTTGTGGGA GGGGAACTGA AGGCCTCGTC CGACGCAGGC
GACGCTAGGT TCTTCTCCCT TGAGGAGATA AGAAAACTTG ACGTAAGCTC CACTACGCTA
GAGATGCTGG AGAGGTTTTG GAAAGGGGAA AAGATGCCCT ATCTGATCAC TGAAATCTCC
AAGTAG
 
Protein sequence
MQRPLVAVGS VIFNRDKVLL VRRLHPPNQD RWAVPGGKVE FGESIREAVI RETIEETGLQ 
VEPRVLMAVV EVFREGYHYV ILDFISEVVG GELKASSDAG DARFFSLEEI RKLDVSSTTL
EMLERFWKGE KMPYLITEIS K