Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2076 |
Symbol | |
ID | 5105056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1994789 |
End bp | 1995214 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640507966 |
Product | NUDIX hydrolase |
Protein accession | YP_001192140 |
Protein GI | 146304824 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.963545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGAC CTTTAGTTGC GGTAGGATCA GTAATTTTCA ACCGGGATAA GGTGCTATTG GTGAGGAGAT TACATCCCCC TAACCAGGAT AGGTGGGCCG TTCCAGGGGG TAAGGTAGAA TTTGGAGAAT CCATAAGGGA GGCAGTAATT AGGGAAACTA TCGAGGAAAC GGGATTGCAG GTGGAACCAA GGGTCTTGAT GGCTGTCGTT GAGGTGTTTA GGGAGGGCTA TCATTATGTG ATCCTGGACT TCATCTCTGA GGTTGTGGGA GGGGAACTGA AGGCCTCGTC CGACGCAGGC GACGCTAGGT TCTTCTCCCT TGAGGAGATA AGAAAACTTG ACGTAAGCTC CACTACGCTA GAGATGCTGG AGAGGTTTTG GAAAGGGGAA AAGATGCCCT ATCTGATCAC TGAAATCTCC AAGTAG
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Protein sequence | MQRPLVAVGS VIFNRDKVLL VRRLHPPNQD RWAVPGGKVE FGESIREAVI RETIEETGLQ VEPRVLMAVV EVFREGYHYV ILDFISEVVG GELKASSDAG DARFFSLEEI RKLDVSSTTL EMLERFWKGE KMPYLITEIS K
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