Gene Msed_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2068 
Symbol 
ID5105048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1986395 
End bp1986742 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content37% 
IMG OID640507958 
Producthypothetical protein 
Protein accessionYP_001192132 
Protein GI146304816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.898635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATT TATCCTCTAT CCACATTATA CGAGAGATGT CGATCCCAAA GAAATTTTAT 
CAGTTGCAGG ATCTCATCCT GCTAAGGACG TCCCTGGAGA AGGTAAAATT GCACGTAGAT
GAGAGGAAGG ATAAAACCGT TTATCAATGG GTTAACAAGG AGCTTACCGA GTTTCAGAGG
AAATATGACA AGATAGGTTG CAAGGAGCAA GGTGATGAGA TAATTAGGGG TATAAGGGAG
GAAAGATGGG AATTAATTAA GATAAATGTG GATTCATGTT TGAAATTCCT TAAAGAAGAG
ATAGAAAAAA TATATAGGGA AATGGCCGAT TCCAACGTTA ATGTATGA
 
Protein sequence
MSYLSSIHII REMSIPKKFY QLQDLILLRT SLEKVKLHVD ERKDKTVYQW VNKELTEFQR 
KYDKIGCKEQ GDEIIRGIRE ERWELIKINV DSCLKFLKEE IEKIYREMAD SNVNV