Gene Msed_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2061 
Symbol 
ID5105041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1980398 
End bp1981204 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content46% 
IMG OID640507951 
ProductP-loop ATPase/GTPase-like protein 
Protein accessionYP_001192125 
Protein GI146304809 
COG category[R] General function prediction only 
COG ID[COG4028] Predicted P-loop ATPase/GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTCC TGATCAATGG AGGCTTACCA CACGACTCAG GGAAGACTAG GTTTGGGCTA 
ACTCTCATCT CCCTCCTCAG GGAGGTTGGA ATAAACCTTT TTCCCATGAA ACCTGTGGCA
GGACATAACG GCTGGTATAG CTACTCAACG TTGACGCGAA GCATGGAACT TGGTGTACTC
GTGGGCAATG ACGCCCTAAA TTACTACGAA AGTACGAGGG AGAGTATTGA GGAAATTAAT
CCGTTCGCAG TTTTGTTTTT CCCTGTGGAT CCTGAAAGCA TCGAGCGGAA CTTCCCCTAT
TACCTCTCTT TAATGGACAG GGGTTATCCC GTCATGATGA GAATGACCGT TGAACAAAAG
AGCATGTACC TTCGAGCCCC CTCTCGCTTG ATTTCATCCT CCATGAGGGA TGTACTCGAG
AGGCTGATTT CAAGGTTTGA TCCAGTTCCA GTGGAGGAAC GTGAGGTGTG GAGACTCATA
GAAAATTCGG GGGAGATCGT GCATAACAAC GTTATCAGTG CATTGAATCG TCACAAGAAT
GTTCTTATCG AGTCATACAA TAATGCCTCC TGTCCCACAT ATTATCCACC AGGGGTAGAC
TACGTTATCA CCATTGTCCC TGGAAGAGCC TATGTCTTCG ACGGACGGGA GTACTCTAAG
TTCCTCAGTC TATCCTCTCT TCCGCCTTGG TTGATTAAGA CAGAGGAGGC ATTCAAATTC
CTCAAACCAG AGACCTATAC CCTGGAATTA GCGACATCTA GAAGTCCTGC ACTCATAGAT
TTCTTGATAA AAAAGGAAAT TATTTAG
 
Protein sequence
MRLLINGGLP HDSGKTRFGL TLISLLREVG INLFPMKPVA GHNGWYSYST LTRSMELGVL 
VGNDALNYYE STRESIEEIN PFAVLFFPVD PESIERNFPY YLSLMDRGYP VMMRMTVEQK
SMYLRAPSRL ISSSMRDVLE RLISRFDPVP VEEREVWRLI ENSGEIVHNN VISALNRHKN
VLIESYNNAS CPTYYPPGVD YVITIVPGRA YVFDGREYSK FLSLSSLPPW LIKTEEAFKF
LKPETYTLEL ATSRSPALID FLIKKEII