Gene Msed_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2053 
Symbol 
ID5105033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1974805 
End bp1975203 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content41% 
IMG OID640507943 
Productregulatory protein, ArsR 
Protein accessionYP_001192117 
Protein GI146304801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.611537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGCT TAACAGGGAC TAGGCGAAAG ATATACTACT ATCTTGTGAA GCAGAAGGAT 
CCTGTCCCTC TGAGGAAAAT TCAGAGGGAA CTTAAATTAA GCTCTCCGTC ACTCGCTTTA
TATCACCTGA AGAAACTGGA GGAGAACGGT CTGGTCAAAG AGACAGATGA TGGCTACGTG
GTTACTAAGC TAATCCTAGG AGATTTCGTC AAATTAATGA ACGTGCTTAT TCCCAGGTCG
GCGTTTATGG CTTCGTTCCT TATTGCGTCC CTGATACTGC TTTGGGTCAT TAACATGATA
AACCCGTATT CCGTCACCCT TTTCTCCTCT ATTGTTATTG CGATTCCTGC TGGTATTTTT
ATCATTGATG TTGTAAGAAA ATACAATGAA ATAAGATAA
 
Protein sequence
MESLTGTRRK IYYYLVKQKD PVPLRKIQRE LKLSSPSLAL YHLKKLEENG LVKETDDGYV 
VTKLILGDFV KLMNVLIPRS AFMASFLIAS LILLWVINMI NPYSVTLFSS IVIAIPAGIF
IIDVVRKYNE IR