| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2032 |
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| Symbol | |
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| ID | 5105254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1958264 |
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| End bp | 1960021 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507920 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001192096 |
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| Protein GI | 146304780 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.329827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTAA AGGAGTTTGT TGTTTCGTTG TTCCAATTGG ACAAGGACTG GACTACTAGG
ATTGTCATGG CTATGCTAGT CATGGGAGTG ATTTGGGGCC TATTGGGAGT GATAGACTCC
CTTATGGTGA GGATACAAGA GACCGCGTGG GGGCTGAGTG GAACCCTAGT GTTCACTCCG
CAGGAGTACT TCGCCAGCAT CACGTTGCAT GCTGAGAGGG ACCTCTTCGG ATTCGCTCAG
CAGGTGATAT ATGCCATTTT CATTTATTTC ACAATTAAGC TTCTTAACCT GCAACCTAGG
GCTAAGTGGT TGCTCAACAT CTCCTTCATC CTGATTAACA TTTCAATGAT GTTTATGGAA
GGGCCGATTG TCGTTGCTCC CACTTTTAAT GACAACTACT TCAGTGCTAC CGACTGGTAC
TACATATCTC CCATGGGAAT TCCCAACTAC TCCAATTACG TGGTATCTCC GCTATTCTTT
TACGGTTGGC TTCTACTGGA CGCCTTCACC TATCTAGCGG GAATATGGAT CGTGTACCAT
TATTATATAG CGTCCAAGCA ACTTAAGGAG AAGCTACCTG TTCCTCTGGT ATTTTTCCTC
ATGAATACCT TGCTTTTCAT GATAGGCTAC TCTGGGGTAA CCGCAGCTGA TGTATGGGAC
ATACTAGCGT TCTATAACCT GGTGCCCCTC AACGCAATTG CGAACCAAAT AGCCTTCTGG
ATCTTTGGGC ATGCTATCGT GTATATGGCG TGGATGCCTG CAGTTGGAGC ACTTTATCTT
CTTATTCCAA CACTAGCTAA CAAACCGCTT TACAGCGATA GAATGGGTAG AATTTCTGCT
CTGCTCTACT TAATATTTTC CAACAATGTA CCCATTCATC ACCTATACAT GGTTAACCTT
CCAGTCTCTA TCAAGATACT CCAGGAAGTT CTTACGTATG CAGTTGTGGT CCCCTCAATG
TTGACCTTCT TCAATCTATG GGCTACGGTA AAGGGCGCAC AGGTTAAGTT CAACGTGATA
ACTGCTTTCA CTGTGACATC CTTCTCTGGG GCCATAGCTG CAGGAGTTAC CGGTATATCT
AACGCAACCA TAGCCTTCGA CGCAATAATT CACAACACCG ATTGGGTAGT GTCCCACTTC
CATGCAATGA TACTGCTGTC CATAGTTCCA GCAGCAATGG CAGTGCTTTA CTTCATGATA
CCCATGATGA CTGGGAAGCA GTGGTTCTCA TCCAAGATGG CGTGGGTTCA TTGGATTGGT
TACGTGTTTG GATCCATTCT CTTCATAGTG GGCTATGAAT TGCAGGGATT CGAGGGCTTG
GTGAGAAGGG CTGAGATCTA TCCTAGAGTA CCGACTCTAA TTACGGCAGA GGTTATCTCC
ACTGTGGGTG CAGTAATAGC AGAGCTTGCT ACCCTAGTTT GGTTCCTGAA CCTGGTCCTT
ACCCTAGTTA AGGGTAGAAA TATGAACCTA GAGGGAGTAG GGCTTGGCCA GCTCATTGGC
ACCGTGGGAG CTGCACTAGA GTGGAATGGA GAAAACATTA ATATTCCAAG TTTATTCAGT
AAAAACATGA TAAAGAAAGG ATTAAGTGGC CTGTGGACTC TGGGAATATT GGGTGCACTT
GTGATAGTGA TTAGCATGTT CCCACTGGCC TTCTCTGGTA ACACTTACAA CGCAATGCCA
TGGATCTGGA TAGTCCTGCT GTCCATAGGG ATAGTGCTGA TCTCGTATCC CGTATTAAAG
GGGGCTAAAA GTTTATGA
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| Protein sequence | MGLKEFVVSL FQLDKDWTTR IVMAMLVMGV IWGLLGVIDS LMVRIQETAW GLSGTLVFTP
QEYFASITLH AERDLFGFAQ QVIYAIFIYF TIKLLNLQPR AKWLLNISFI LINISMMFME
GPIVVAPTFN DNYFSATDWY YISPMGIPNY SNYVVSPLFF YGWLLLDAFT YLAGIWIVYH
YYIASKQLKE KLPVPLVFFL MNTLLFMIGY SGVTAADVWD ILAFYNLVPL NAIANQIAFW
IFGHAIVYMA WMPAVGALYL LIPTLANKPL YSDRMGRISA LLYLIFSNNV PIHHLYMVNL
PVSIKILQEV LTYAVVVPSM LTFFNLWATV KGAQVKFNVI TAFTVTSFSG AIAAGVTGIS
NATIAFDAII HNTDWVVSHF HAMILLSIVP AAMAVLYFMI PMMTGKQWFS SKMAWVHWIG
YVFGSILFIV GYELQGFEGL VRRAEIYPRV PTLITAEVIS TVGAVIAELA TLVWFLNLVL
TLVKGRNMNL EGVGLGQLIG TVGAALEWNG ENINIPSLFS KNMIKKGLSG LWTLGILGAL
VIVISMFPLA FSGNTYNAMP WIWIVLLSIG IVLISYPVLK GAKSL
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