| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2024 |
|---|
| Symbol | |
|---|
| ID | 5105246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1952654 |
|---|
| End bp | 1953250 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640507912 |
|---|
| Product | molybdopterin-guanine dinucleotide biosynthesis protein A-like protein |
|---|
| Protein accession | YP_001192088 |
|---|
| Protein GI | 146304772 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0746] Molybdopterin-guanine dinucleotide biosynthesis protein A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.362426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTACAGAG ATTCCTTTGA CGCTGTAATT CTCGCTGGCG GGAATTCCAT CAGGTTTGGT
ACTGACAAGT GTGAGTTTGA AATCGACGGA AAATCCATGT TGAAGAGGGT AGCCGAACTT
TTCGAATTAC CCATAATAGT CACGGACAAA CCGAGGGACA TTAAGGGCAA AATTGTACAA
GATAACTGGA AAGATGGTCC CCTGAAGGCA CTTAAACTTG CTCTGAAGCT GGTTTCCAAG
GAGAAGGTTT TCGTGACTGG ATGTGATTTT CCCTTCCTAT CCAGAGGACT CGTGGAAATT
CTCTGCTCGA AGCAGGAACA TGTGGCTACC ACTCTCACGT GCGGTAAAAT TCAACCTCTA
CTATCATGCT ATTCTCTTGA CTACCTTAAG ACCCATATTG ATAATTTCAA ATCCATGACT
GATCTACTAA TAAACTCCCC GTCCGTCTAC ATAGCAGGAC TCAGGGAAAT CACAATGATA
GACCCGCATC TTAGGACTCT CCTCAACGTC AACAGAGTAA GTGATCTCTG GAAAACCCAA
AGGGGCTTCT GGAACACTAG AATATGGAAT AATACCACGA GATTATTTGT TCTATAG
|
|---|
| Protein sequence | MYRDSFDAVI LAGGNSIRFG TDKCEFEIDG KSMLKRVAEL FELPIIVTDK PRDIKGKIVQ
DNWKDGPLKA LKLALKLVSK EKVFVTGCDF PFLSRGLVEI LCSKQEHVAT TLTCGKIQPL
LSCYSLDYLK THIDNFKSMT DLLINSPSVY IAGLREITMI DPHLRTLLNV NRVSDLWKTQ
RGFWNTRIWN NTTRLFVL
|
|---|
| |