Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2016 |
Symbol | |
ID | 5105238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1947794 |
End bp | 1948435 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640507904 |
Product | FeoA family protein |
Protein accession | YP_001192080 |
Protein GI | 146304764 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.15744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT TATCGGAGCC ACTGGAAAAT TACCTAAAGG AGATCTATGA GCTGGAGGAA ACAAAGGGTC ACGCTAAGGT TGTTGACCTG ATCGACGCAT TCTCGATTTC CCCAGGCACA ATTAGTAAGG CATTGGACAG GCTGGAGTCC CTTGGTTTCA TAGACAGGAA ATCAAGGAGG ATAAAGCTTA CCGAGGACGG AAAGAGACTC GCAATTAGGT TAATAAGGTC ACACCGCCTC TCCGAGAGGC TCCTCACAGA TATAGTGGGC CTGGACTGGA TTAGGGCGCA CGAACTGGCA CATAGGCTAG AACACATATG GCCTGAGGAT GTTCTTGACA AGATAGATGA GGTGGTGGGT CATCCCAAGA CCTGTCCCCA CGGGCACCCT ATCCCTGGGA GGGAAGATCG AGTGGAGGGC GTTCCACTTA CCGAGACAAA ACCTGGAGAA TACACCGTGA TCATGATAGT TAAGGAGAAA GAGTGGATAT TGAGAATGGC TGACTCCCTA GGCCTTCTAC CAGGGAGGAA CATCGTGGTA CTGGATAACC TCAATGGGGA AGTGAAAGTC CAGATAAATA ACAAGGAAAA TAAGGTTCCC CGATCTCTTG CAGAGCAGGT GATAGTCCGT GGAGCTCAGT GA
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Protein sequence | MSELSEPLEN YLKEIYELEE TKGHAKVVDL IDAFSISPGT ISKALDRLES LGFIDRKSRR IKLTEDGKRL AIRLIRSHRL SERLLTDIVG LDWIRAHELA HRLEHIWPED VLDKIDEVVG HPKTCPHGHP IPGREDRVEG VPLTETKPGE YTVIMIVKEK EWILRMADSL GLLPGRNIVV LDNLNGEVKV QINNKENKVP RSLAEQVIVR GAQ
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