| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2011 |
|---|
| Symbol | |
|---|
| ID | 5105233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1943379 |
|---|
| End bp | 1944431 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640507899 |
|---|
| Product | translation factor SUA5 |
|---|
| Protein accession | YP_001192075 |
|---|
| Protein GI | 146304759 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTGC TGAAGATAGA TCCACTTAAT CCAGAAATAG AGTTGATAAG GAAGGCCGCT
GAAGTTATTA GGTCTGGGGG TCTAGTTGCT TTTCCCACCG AAACAGTGTA CGGCCTAGGT
GGTAATGCCC TAGATCCGAA GGCGGCCGAG AAAGTGTTTA AGGCTAAGAG GAGGCCAATG
GACAATCCTC TCATAGTTCA TATAGCTGAC CTAAGTCAAC TGGAAGAGGT TAGTGTGGAC
GTTCCTCCAG AGGTTTTAGA TTTAGCCCAG CGGGTCTGGC CGGGTCCGCT CACCTTCATT
CTCAAAAGGA ACCCAAGGGT ACCTCTAGAA ACTACGGGGG GCCTCGATAC CGTCGCCGTT
AGGATGCCAG CACACCCAAT CGCCCTTCAA CTAATCAGAG AGAGCGGTGT GCCCATTGCC
GCCCCAAGCG CCAACCTGGC CACAAAACCT AGTCCAACCC TTGCGGAGCA CGTCATCCAG
GACCTTGACG GTTCAGTGGA TGTTGTTATT GACGGGGGAG AGACCTTTTT CGGGGTCGAA
TCCACTATCA TAAACCTTAC CGTATCCCCT CCTGTTCTCC TAAGACCTGG ACCCTTCACT
GTAGAGGAAC TCAACTCTCT TCTAGGTGAG GTCGTCGTTC CAAAGGAGGT TGCAGAGGGT
GGGCAATTCA ACGTAGCTTT AGCTCCCGGA ATGAAATACA AGCATTATGC GCCGAGTAAA
CCCCTCTACC TAGTGGAGAA AAAGTCAATC TTCAAGGAAG TTGTAAAAAG GCTAAGGCAA
AAGAAAAAGG TAGCTGCTCT CTGCTCCCAG GAAACTTGCG CTGACGTGGA TGAGCCCAAG
ATAATCCTGG GAACTAGCGA GAACCTGTAC ACTGTTGCAA AGAACCTGTT TAAGTCCTTT
AGGCAACTTG ATACCCTAGA CGTGGATCTA GGTGTCATGG AGCCGTTTCC TGAAAGGGGG
ATTGGGTTGG CCATCATGAA TAGGGCAAAA AAGGCCTCAG CTCACATGAT AATACATTCC
GTGGAGGAGG CTGACAAGCT TGCAGATAGT TAA
|
|---|
| Protein sequence | MIVLKIDPLN PEIELIRKAA EVIRSGGLVA FPTETVYGLG GNALDPKAAE KVFKAKRRPM
DNPLIVHIAD LSQLEEVSVD VPPEVLDLAQ RVWPGPLTFI LKRNPRVPLE TTGGLDTVAV
RMPAHPIALQ LIRESGVPIA APSANLATKP SPTLAEHVIQ DLDGSVDVVI DGGETFFGVE
STIINLTVSP PVLLRPGPFT VEELNSLLGE VVVPKEVAEG GQFNVALAPG MKYKHYAPSK
PLYLVEKKSI FKEVVKRLRQ KKKVAALCSQ ETCADVDEPK IILGTSENLY TVAKNLFKSF
RQLDTLDVDL GVMEPFPERG IGLAIMNRAK KASAHMIIHS VEEADKLADS
|
|---|
| |