| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1999 |
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| Symbol | |
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| ID | 5103386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1932931 |
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| End bp | 1933986 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507887 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001192063 |
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| Protein GI | 146304747 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.156539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGG AAGCTATACT ATACACCAAG TTAGATGGCA GGATCAGATG TGACGCCTGT
GCCAGGAAAT GCCTCATTGG TGAGGGACAG GTTGGGTTCT GCGGAGTCAG GTCTGTCTCC
ACGGGGAAAT TATACTTGAA TGTATACGGT AAGGTCGCAG CTGCTCACAT AGACCCCATA
GAGAAGAAGC CCCTTGTTCA CTTCTATCCA GGTTCAAGGG TACTTTCGTT CTCCACATTT
GGATGTAATT GGATGTGCAT GTACTGTCAG AACTACGACA TAAGTCAGAG GAGAGTGGTG
GATGGAGCAG ATCTAATGCC TGAGGATATA GTGGATATGG CCAGGGCATA TGAGGTTGAA
GGGATTACCT ACACATATAA CGAACCGGCA ATCTTTGCTG AGTTCGCCCA CGACACGGGT
GTTCTGGCTA GGAAATTTGG GTTATTAAAC ACCATGGTTA CCAACGGGTA CTGGAGCGAA
GAACTTGTGG ATTACGTTAA GGACTTTCTG GACGCAGTTA CTGTGGATTT CAAGGGAAAC
GGGGAACCTA AGTTCATGAG AAGATACACA GGAGCCTCTG GGCCAGATCC AATCTTTAAC
ACTATCTCAG AACTGATTAA AAGAAAGATT CACGTGGAGA TTACGGACCT AATCATTCCA
GAAATAGGGG ATAACCTGGA ATTCGCTAAG GGATTTCTCA AGAGACTATA TGACGTGGTT
GGACCTGATG TTCCAATACA TTTCCTCAGG TTCCACCCAG ACTACAAGCT GAACAACCTA
CCCTTGACTC CAGTGGAGAC TCTTGAGGCA CATTACAAGA TAGCAAAGCA GGTGGGATTC
AGATTCGCCT ACGTGGGAAA TGTTCCAGGT CATCCCCTCG AGAACACTTA CTGCCCACAG
TGCGGTAACG TAGCCATAAG GAGATACGGC TTCAGAATAC TGGAATGGAA TCTAACTGAG
GATATGAGGT GCACAAGATG CGGTTATAAG CTTCCCATAG AGGGAAGAAG ATCCAAACAC
TACCGTGAGG ATAGATTCGA ATCAATCTAC ATCTAG
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| Protein sequence | MQKEAILYTK LDGRIRCDAC ARKCLIGEGQ VGFCGVRSVS TGKLYLNVYG KVAAAHIDPI
EKKPLVHFYP GSRVLSFSTF GCNWMCMYCQ NYDISQRRVV DGADLMPEDI VDMARAYEVE
GITYTYNEPA IFAEFAHDTG VLARKFGLLN TMVTNGYWSE ELVDYVKDFL DAVTVDFKGN
GEPKFMRRYT GASGPDPIFN TISELIKRKI HVEITDLIIP EIGDNLEFAK GFLKRLYDVV
GPDVPIHFLR FHPDYKLNNL PLTPVETLEA HYKIAKQVGF RFAYVGNVPG HPLENTYCPQ
CGNVAIRRYG FRILEWNLTE DMRCTRCGYK LPIEGRRSKH YREDRFESIY I
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