| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1993 |
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| Symbol | |
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| ID | 5103380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1929295 |
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| End bp | 1930239 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507881 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001192057 |
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| Protein GI | 146304741 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.136634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA AGGTATCTGT AGTTGGAGCA GGAGTTATAG GCGTAGGTTG GGCGACCCTT
TTTGCGTCTA AGGGATACAG CGTCTCTCTC TACACCGAAA AGAAGGAAAC CCTAGACAAG
GGAATAGAGA AGCTAAGGAA CTACGTTCAG GTGATGAAGA ACAACTCCCA GATAACCGAG
GACGTCAATA CCGTGATCTC GAGGGTTTCT CCCACCACGA ATCTGGATGA GGCCGTTAGG
GGAGCCAACT TCGTCATTGA GGCAGTTATT GAGGATTATG ACGCAAAAAA GAAAATCTTT
GGATACTTGG ACAGCGTCCT TGACAAGGAG GTTATACTAG CTAGCAGTAC TTCAGGTCTC
CTCATAACAG AGGTTCAGAA GGCAATGTCC AAGCACCCTG AGAGGGCGGT GATAGCCCAT
CCCTGGAATC CACCCCACCT TCTACCGCTT GTCGAGATAG TTCCAGGAGA GAAGACCAGT
ATGGAAGTGG TGGAGAGGAC GAAGTCCCTC ATGGAGAAGC TGGACAGAAT AGTAGTGGTG
CTCAAGAAGG AGATTCCGGG TTTCATAGGG AACAGGCTCG CCTTTGCTCT TTTCCGAGAG
GCCGTATACC TTGTAGACGA GGGTGTGGCC ACTGTGGAGG ACATCGACAA GGTAATGACA
GCGGCAATTG GACTCAGATG GGCCTTCATG GGTCCGTTCC TCACATACCA TCTAGGTGGT
GGAGAAGGAG GGCTTGAGTA CTTCTTTAAT AGGGGTTTTG GGTACGGTGC TAACGAATGG
ATGCATACCC TGGCAAAATA CGACAAGTTC CCCTACACTG GGGTTACGAA AGCGATACAG
CAAATGAAGG AATACTCCTT CATAAAGGGT AAGACTTTCC AGGAAATTTC GAAGTGGAGG
GACGAAAAGC TCCTGAAGGT ATACAAACTA GTTTGGGAAA AATAA
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| Protein sequence | MTEKVSVVGA GVIGVGWATL FASKGYSVSL YTEKKETLDK GIEKLRNYVQ VMKNNSQITE
DVNTVISRVS PTTNLDEAVR GANFVIEAVI EDYDAKKKIF GYLDSVLDKE VILASSTSGL
LITEVQKAMS KHPERAVIAH PWNPPHLLPL VEIVPGEKTS MEVVERTKSL MEKLDRIVVV
LKKEIPGFIG NRLAFALFRE AVYLVDEGVA TVEDIDKVMT AAIGLRWAFM GPFLTYHLGG
GEGGLEYFFN RGFGYGANEW MHTLAKYDKF PYTGVTKAIQ QMKEYSFIKG KTFQEISKWR
DEKLLKVYKL VWEK
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