| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1977 |
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| Symbol | |
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| ID | 5103364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1911476 |
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| End bp | 1912177 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507865 |
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| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
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| Protein accession | YP_001192041 |
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| Protein GI | 146304725 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
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| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGAAAA TTTCAGAGGG AAAGACAAAG GAGGTCTTTT CCCTTGATAA CGAGCACGTT
CTCCTTAGGT TCAAGGATTC TGTAACGGCT GGGGATGGGG CGAAGGCGGA TATAATAGAT
GGAAAGGGCA TCCTAAACGC CCAGACCTCA GCTCTACTCT TCAGGTTACT GGAGAGAGAT
GGGATTGAAA CACATTACGT GGGAATGAAG GATGAGAGAA CCATGATTGT CAAGAGGCTG
GCCATGATAC CAGTCGAGGT CGTATTGAGG AACTACGCCA CGGGGAGCAT CGTAAAGAGG
TTACCCATAA AAGAGGGGGA GGCCTTTAAC CCTCCCATTG TCGAGTTCTT TCTCAAGGAC
GACGCGCGTC ACGATCCCCT TCTCAACTAT CACCACATGA GACACCTGAA GCTCATGAAC
GAGGAAGAGG CCAGACTTGT GGAGGAGGTC ATGGTGAGGG TTAATCAAAC GCTGTCGAAG
GTGATCTCCA AGATGGGTCT AATCCTATAC GACTTCAAGT TGGAGTTCGG GAGAGTCAAC
GGTAGACTAG TGGTGGGAGA CGAAATCTCC CTGGATTCCA TGAGGGTGAG GGATCCCACA
GGAAGGATCC TGGATAAGGA CCTCTACAGA AAGGGGTACC CCCTGGATCA AGTGAAGGCA
TCCTACGTGG AATTTCTAGA TAGGCTGAGG TCTGTAGCAT GA
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| Protein sequence | MEKISEGKTK EVFSLDNEHV LLRFKDSVTA GDGAKADIID GKGILNAQTS ALLFRLLERD
GIETHYVGMK DERTMIVKRL AMIPVEVVLR NYATGSIVKR LPIKEGEAFN PPIVEFFLKD
DARHDPLLNY HHMRHLKLMN EEEARLVEEV MVRVNQTLSK VISKMGLILY DFKLEFGRVN
GRLVVGDEIS LDSMRVRDPT GRILDKDLYR KGYPLDQVKA SYVEFLDRLR SVA
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