| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1974 |
|---|
| Symbol | |
|---|
| ID | 5103361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1909431 |
|---|
| End bp | 1910063 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640507862 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001192038 |
|---|
| Protein GI | 146304722 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0602] Organic radical activating enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGTACT GGATTGTTGA GATATTCACG TCGATACAGG GGGAAGGACT AGTCATAGGA
AAGCCCTCAA ACTTCGTGAG GTTAGCTGGA TGTAATCTCC GTTGCGTTTG GTGCGACACC
AAGTTCTCGT GGATAAGGGA GGACGGCGTA CCCATGGAAC TTGAGGAAAT AACTGGCAAG
TTGAGCAGGT CCGTTAAGTG GACCACAATC ACTGGCGGAG AACCTCTTCT GCAGGACATC
TTGCCCTTAG CCTCAACCCT GAAGAACCTG GGTTACAACG TCGCTGTGGA GACGAACGGA
ACGATAAAGC CAAAACAGGA GCTGAGGAAG ATTGTGGACG TGTTCTCCGT GTCCCCCAAA
CTATCTAACT CGGGGCATAA GTTAAGGTAT GACTTCTCCG AGGATTGGGC CACATATTAT
AAGTTCGTCA TAGTAGAACC CAATAGGGAC CTCAGGGAGG TGAAGAACTT CGTTGAGGAG
CACAGGATAG ATCCCGAGAA GGTCATTGTT CAACCAGACG GTAATAGACA GGACTACATT
CAAGCTCTCA AGGAACTGTC AGACGCTGTT ATGGAGCTGG GACTCCCCTT CAGGGTTCTC
CCCCAACTTC ACAGAATTAT TTCCTATAGA TAG
|
|---|
| Protein sequence | MRYWIVEIFT SIQGEGLVIG KPSNFVRLAG CNLRCVWCDT KFSWIREDGV PMELEEITGK
LSRSVKWTTI TGGEPLLQDI LPLASTLKNL GYNVAVETNG TIKPKQELRK IVDVFSVSPK
LSNSGHKLRY DFSEDWATYY KFVIVEPNRD LREVKNFVEE HRIDPEKVIV QPDGNRQDYI
QALKELSDAV MELGLPFRVL PQLHRIISYR
|
|---|
| |