Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1966 |
Symbol | |
ID | 5103353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1903861 |
End bp | 1904508 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640507854 |
Product | orotidine-5'-phosphate decarboxylase |
Protein accession | YP_001192030 |
Protein GI | 146304714 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAGGG TGATACTCTC CCTCGACTCG CCCATCCCTG AAGAGACGTT AAGGAAACTT AATGGGAAAG TGGCTGGAAT TAAGGTGGGA TGGCCTCTCC TACTTAACCT GGGTAAGGAG AAAGTTAAGG AACTTGTGGG CCTCGTTGAT GGGATCAAAA TCCTCGATCT GAAACTTGCA GACATAGATA ACACCATGAT ATTAATAGTG GACGAGCTAA AGGACATCAC GAACTCCTTT ATAGCGCATG CCTTTGTGGG AGTGGAGGGA AGTCTTGCCT CCCTTAGCCA GAGGGTCGAC CTCTTCTTGG TCCTGTCCAT GTCCCACCCA GGGTGGAACG ACGCCTTCTA TCCGTACCTC AGGGAAGTGG CAAGAAGGGT TAATCCAAAG GGGTTTGTGG CACCTGCAAC TAGACCTTCC ATGATCTCGA GGGTTAAGGG AGATTTCCCG GACAAACTGG TGATATCTCC AGGTGTAGGC ACACAGGGGG CGAAACCTGG AATTGCCCTA TGCCATGGGG CAGACTACGA GATAGTGGGA AGGAGCGTGT ATCAGTCAGC CGATCCCGTT CGGAAGCTGG AGGAGATAGT GAGGTCCCAG GAGGAGGTTC TGAGTTCCTG TGAAGGAGCA AAAGATCGGG GTTCATGA
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Protein sequence | MNRVILSLDS PIPEETLRKL NGKVAGIKVG WPLLLNLGKE KVKELVGLVD GIKILDLKLA DIDNTMILIV DELKDITNSF IAHAFVGVEG SLASLSQRVD LFLVLSMSHP GWNDAFYPYL REVARRVNPK GFVAPATRPS MISRVKGDFP DKLVISPGVG TQGAKPGIAL CHGADYEIVG RSVYQSADPV RKLEEIVRSQ EEVLSSCEGA KDRGS
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