Gene Msed_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1948 
Symbol 
ID5103335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1892015 
End bp1892296 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content52% 
IMG OID640507836 
Productphosphoribosyl-ATP pyrophosphatase 
Protein accessionYP_001192012 
Protein GI146304696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG TTCTCGAGGA GTTATCAGGT ATTATAGCTC AAAGGCTTAG GGAGATGCCG 
GAGGGAAGCT ATACGGCCTC CCTTGCTAAG AAGGGAAAGG GGTATGTGGC CAGGAAAGTG
GGGGAAGAGG CCGTTGAGGT AGTCGTGGCA TCGCTCTCCG AGGGAAGAGA AAGGGTAGTA
AGCGAGACGG CAGACCTCAT CTATCACCTT CTAGTCCTCC TTGCCATGGA GGGGATATCC
TTGGATGAGG TAAGAGATGA GTTGAGGAGG AGAATGAAAT GA
 
Protein sequence
MTDVLEELSG IIAQRLREMP EGSYTASLAK KGKGYVARKV GEEAVEVVVA SLSEGRERVV 
SETADLIYHL LVLLAMEGIS LDEVRDELRR RMK