| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1946 |
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| Symbol | |
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| ID | 5103333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1890083 |
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| End bp | 1890838 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507834 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001192010 |
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| Protein GI | 146304694 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.681932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.611463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACAA GGAGAATAAT AGCCTGTCTT GACGTTAAGG ACGGAAAGGT GGTCAAGGGA
GTCAGATTTC TCGACCTGAA GCTGAAGGGT GATCCCGCTG AGCTTGCCTC TAGGTATGAG
GAGGAAGGTG CGGACGAAAT AGTGTTCCTC GATATATCAG CCACGGTGGA GGGAAGGAAG
ACCCTTCTAG AGAAGGTGAG GGAGACAGCA AGCGTTCTAT CCATTCCCTT GACTGTGGGA
GGAGGAGTGA GGACTGTTGA AGATGTGTCC AACCTGTTGT CTAACGGAGC AGATAAGGTT
AGTCTCAACA CGGTCGCGGC GGAGAACCCC TCAGTGGTTT CAATGGCTTC GCGGGAATTT
GGAGCTCAGG CCGTGGTAGT GGCCATAGAC GCCAAGAGGG TTGGAAATGG CTGGAGAGTC
TTCGTGAGAT CTGGGACCAA GGACACAGGC TTAGACGCGG TGGACTGGGC TAAACGCGTT
GAGGAAATGG GAGCCGGAGA GATCCTTCTC ACTAGCATTG ACAGAGATGG AACCAGGGAT
GGCTACGACC TAGAGCTCAC CAAGGCCGTG GTTAGGGCCA CCAAGGTTCC TGTAATAGCC
AGCGGAGGAG CTGGAAAACC CGATCATTTC CTTTCCGTGT TTAGGCAAGC TGGAGCAGAT
GCAGCCCTGG CAGCGGGTAT ATTTCATGAT GGGGTAATCA GGATACGTGA ATTGAAGGAT
TATTTAAAAG ATGCAGGAAT AGAGGTGAGA ACGTGA
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| Protein sequence | MTTRRIIACL DVKDGKVVKG VRFLDLKLKG DPAELASRYE EEGADEIVFL DISATVEGRK
TLLEKVRETA SVLSIPLTVG GGVRTVEDVS NLLSNGADKV SLNTVAAENP SVVSMASREF
GAQAVVVAID AKRVGNGWRV FVRSGTKDTG LDAVDWAKRV EEMGAGEILL TSIDRDGTRD
GYDLELTKAV VRATKVPVIA SGGAGKPDHF LSVFRQAGAD AALAAGIFHD GVIRIRELKD
YLKDAGIEVR T
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