Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1945 |
Symbol | hisB |
ID | 5103332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1889505 |
End bp | 1890086 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640507833 |
Product | imidazoleglycerol-phosphate dehydratase |
Protein accession | YP_001192009 |
Protein GI | 146304693 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.69921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.850703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTAGGT ATGTTGAGAA AGTCAGGGAA ACCAAGGAGA CTAAGGTCCA AGTGAAGCTG GAGCTAGACG GAGAGGGAAA GGTGGAGATC AGAACCCCAG TTCCCTTCTT TGACCACATG CTTCACTCCA TGCTCTTTTA CATGAAGGTC AACGCCACTA TCCTAGGAGA GGATAAGCAG GGTTACGACG ATCATCACAT AGTGGAGGAC GTTGGAATAA CCCTAGGTCA GGCCATCAAG GATGCGTTGG GAGACAGGAG AGGGATTAAG AGGTTCTCCA GTGCTGTGAT TCCCATGGAT GAGGCACTGG TTCTGGTGGC AGTGGACGTT TCAGGAAGGG GATACGCATC TACTAACCTG GACTTGAAGA GAGAGAAGAT AGGAGATCTA TCCACCGAGA ACGTGGCTCA CTTCTTCTGG TCGCTTGCAA CCAACGCTGG GATCACGCTA CACGTGAGGA AACTTGATGG GGTAAACGAG CACCACATAG TTGAGGCAGC CTTCAAGGGA GTGGGACTTG CCCTGGGAGA GGCATGCTCC ATTCAGGGAG AGGGGATCAG GAGCACGAAG GGATCACTAT GA
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Protein sequence | MSRYVEKVRE TKETKVQVKL ELDGEGKVEI RTPVPFFDHM LHSMLFYMKV NATILGEDKQ GYDDHHIVED VGITLGQAIK DALGDRRGIK RFSSAVIPMD EALVLVAVDV SGRGYASTNL DLKREKIGDL STENVAHFFW SLATNAGITL HVRKLDGVNE HHIVEAAFKG VGLALGEACS IQGEGIRSTK GSL
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