| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1944 |
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| Symbol | |
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| ID | 5103331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1888826 |
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| End bp | 1889512 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507832 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001192008 |
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| Protein GI | 146304692 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.882525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTGG TCCCAAGCAT CGACATCAGT AAGGGAATGG CAGTGAAGAG GGTAAGGGGA
AGGGAGGGAA CTGGACTAGT TCTAGGTGAT CCCCTTAAGA TAGCAGAGGA ACTAAGGAAC
ATGGGTTACA CCTCTGTCCA CCTAGTGGAC CTGGACGCAG CGGAGGGAAA GGGTGATAAC
GTGGAGGTTA TAGAGAGAGT TATGAAGGAT TTCTCAGAGA TCTCCGTTGG TGGAGGTATC
AGGGACAGAT CTAGATTGGA GAGATTCCTT TCGTCCGGAG CAACCAAGGT TGTCATGTCC
ACCCTTGCCT TTACTAAACC TGACACTTTC AGGAGGGTCG TGGCAGGGTA CGAGAACAGG
GTACTGGTGT CTGTGGATTA CTGCGAAAGA AAGGTTCTAA TCAAGGGCTG GAACGAGTCT
GCCATGTCCT TTGAGGAGGC AATCTCTCAC GTAAATTCCC TAGGGGTGAG GGGTGTGATC
TTCACATACG TTTGCAACGA GGGAACCCGA AACGGAATAG ATCCTGAAAT AGGGAGGTAC
GTCAACCTTG TTCAAGGGGA GAAGGGATAC GCCGGTGGAA TAGGCTCAAT TCAGGACCTT
CAGGAACTAG ATAAGATGGG GTTCCATTTT GCCATAGTGG GTATGTCGCT CTATGCAGGA
GTTCTTAGGG GTGTAACCAG TGTCTAG
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| Protein sequence | MKVVPSIDIS KGMAVKRVRG REGTGLVLGD PLKIAEELRN MGYTSVHLVD LDAAEGKGDN
VEVIERVMKD FSEISVGGGI RDRSRLERFL SSGATKVVMS TLAFTKPDTF RRVVAGYENR
VLVSVDYCER KVLIKGWNES AMSFEEAISH VNSLGVRGVI FTYVCNEGTR NGIDPEIGRY
VNLVQGEKGY AGGIGSIQDL QELDKMGFHF AIVGMSLYAG VLRGVTSV
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