Gene Msed_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1943 
SymbolhisG 
ID5103330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1887972 
End bp1888829 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content50% 
IMG OID640507831 
ProductATP phosphoribosyltransferase 
Protein accessionYP_001192007 
Protein GI146304691 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase
[TIGR03455] ATP phosphoribosyltransferase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.919043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATAG CGATACCAAA CAAAGGTAGG TTACAGGGTC CGGCCCTCCA GTTCCTGAAC 
TCCGTGGGAA TCAAGCCAAT GGCCAATGAC GACAGGGCCC TTATGGTACC CACCAGCTGG
GAAGGAGTCC AGTTGGTAAC CATAAGGACG GAGGATATAC CCAACATCGT GGAGACCGGA
GCGGTAGACC TTGGAATAAC TGGGTTAGAT TACGTGATGG AGTCCGGGGC GGACGTTGAG
GAACTGGTTA AGCTGGATTT TGGGAAATCT AGACTAGTTT TAGCCGTTCC CATGTCCTGG
AACATAGAGG ATCCAAGGGA TATGCCCAAG AACGTGAGAA TAGCCACAAA GTATCACAAC
ATAGCCAGAG CTTACCTGGA GAGAAAGGGA ATTGAGGCGA GGTTGGTGAA GATTAGCGGG
GCTGCCGAGA TAATGCCGTC CCTAGGAGCA GCAGACGCCA TCATTGACGT GACCAGCACT
GGAACTACCC TGAAGCTTCA CGGCCTCAAA CCCATTGACG TAGTGAGCGA GAGTTATGCA
ATGGTTATCG GAAACAAGAA CTGGATGAAA TCTGAGGAGG CTGACAGAAT AAACCTAGTA
CTAACCATGA TGAAAGGTGC CCTCAGTGCT AGGGGGAAGA AAATGATTTT CATGAACGTG
GATGACGTTA ACCTTGAGGC AGTGGTCTCC TCGCTTCCCG CGATGCTAGC TCCAGCGGTC
TCTAAGTTGA GTAACTCGAA CGCCTGGGAA GTTGTCACTG TGACTGACGA GGAAATGTTG
CCTGAAGTCA TAGCCAAGGC CAAGACGGCC GGTGCAAGGG ATATTGTAGT GGTTAACATA
GAGAAGGTGA TAAAATGA
 
Protein sequence
MKIAIPNKGR LQGPALQFLN SVGIKPMAND DRALMVPTSW EGVQLVTIRT EDIPNIVETG 
AVDLGITGLD YVMESGADVE ELVKLDFGKS RLVLAVPMSW NIEDPRDMPK NVRIATKYHN
IARAYLERKG IEARLVKISG AAEIMPSLGA ADAIIDVTST GTTLKLHGLK PIDVVSESYA
MVIGNKNWMK SEEADRINLV LTMMKGALSA RGKKMIFMNV DDVNLEAVVS SLPAMLAPAV
SKLSNSNAWE VVTVTDEEML PEVIAKAKTA GARDIVVVNI EKVIK