| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1913 |
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| Symbol | |
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| ID | 5103300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1859124 |
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| End bp | 1860830 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507801 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001191977 |
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| Protein GI | 146304661 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.626919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.494976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGATTC TAGTGGCGTC AGCCTGGCCC TACGTGCAAT CGGTTCCACA TCTGGGCAAC
CTTATAGGCT CAATCCTCTC TGCCGATGTC TTTGCGCGCT ATGCCAGATT AAAGTACGGA
AAGGAGAACG TGGTCTTCGT GAGCGGGAGC GACGAGCATG GAACCCCCAT AGAGATTGAG
GCCATAAAGA GAGGGGTGAG CCCAAAGTCC CTCACAGATC AGGCCCACGA GTACGACAGA
CAACTGTTCC TGAACACCTG GAACATAAGT TTCGACAACT ACACCAGGAC GGAGTCCGAG
GTTCATAAGA GCTTCGTGAA GGAGTTTTTG CTGGGAGTCA GCAAGTACAT CAAGGTGGAG
GAGGAGGAAC TCCCCTACTG TGAAAGGGAC AAGCTATTCC TCCCAGACAG GTTCGTGAAG
GGGACCTGCC CCTACTGTGG ATTTGAGGAT GCACGGGGTG ATCAATGCGA CCGCTGTGGT
AGGCTTTTGA CCCCCTCCCT TCTCATAAAT CCGAAGTGTG CCATCTGCGG TACTCCCCCC
GTTCTCAGGA AGACCAAACA CTGGTTCTTC GATCTCAGGC CCTTCTCTGA ACCCATTAGG
GAGTGGATAA CCTCTTCCCA GGATATGCCA GAGAACGTGA AGGGAACAGC GCTGAGCTGG
GTCAACGAGG GATTAAAACC CAGGAGCCTG ACCAGGGATA ACTCGTGGGG GATCCCAGCT
CCCTTCCCAG GGGCGGAGGG AAAGACGATT TACGTCTGGT TTGAGGCCCT CCTGGGCTAC
CTATCTGCCA CCCTAGAATA TTTCCAGGGA AGAGGGGAAA CGGAGAGGTG GAAGGAATTC
TGGGAGAACG GTAAAGTGAG GAGTTACTAC TTCATAGGAA AGGATAACAT TCCTTTCCAC
GCCGTGATAC TCCCGGCTAT GTTGTTAGCC TCTGAGAAGA ACTACGCTCT TCCCACGGTG
ATAGCTGCCA CCGAGTACCT CATGTATGAG GGGCAGAAGT TTAGCAAGAG CAGGAAAATC
GGGATCTGGA TAGATGAGGC CCCCCTAATC ATGGAGGTGG ACTATTGGAG ATTCCTCCTC
ATAAGGATGA GACCGGAAGA GAAGGACATG AACTTCACCT GGACCGAGGC TATCAGGATA
GTGAATAGCG AGTTAAATGA CGACGTTGGA AACCTCGTGA ACAGGGTCAT AACCATGGTG
AACAGGTATT TCCAAGGCAA GATACCTGAA CCCAAGAACC TGAAGGAGGT GGACATGAGA
CTTCTCTCCA GGGTAGGCGA AACCCTGGAT CAGGTTAGCT TCATGTTCGA GAAGGGCAAG
TTAAAGGGTG GAACTGAACT GGTCCTGACT CTAGCCAGGG AAACGAACGC ATACCTCAAT
GAGAAGGCCC CATGGGACAA GGTAAAGAGC GACGTGGAGG ACGCATCCAA TACCTTGTTC
GTGGCAAGCT CCGCCATCAG GGCAATAGCC CTAATGCTTT ACCCTGTGAT ACCAGAGAAG
GCTAAACTAA TCTACGACCA GTTGGGGCTA GACATAACCC AGGAGAGATG GGATAACGCC
AAGGAACCCC TTAAACCAGG TCACGTTGTT GGGAAGCCTG CCCCGGTTTT CAAGAAGCTT
CCGCAGGACT TTGAGAAAAA CCTTAACGAA ATCCTGGAAA AAGTGAGAAA GGAAGTAGAA
AAAAGAAGAC CTACTCTTCT TAAGTAG
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| Protein sequence | MKILVASAWP YVQSVPHLGN LIGSILSADV FARYARLKYG KENVVFVSGS DEHGTPIEIE
AIKRGVSPKS LTDQAHEYDR QLFLNTWNIS FDNYTRTESE VHKSFVKEFL LGVSKYIKVE
EEELPYCERD KLFLPDRFVK GTCPYCGFED ARGDQCDRCG RLLTPSLLIN PKCAICGTPP
VLRKTKHWFF DLRPFSEPIR EWITSSQDMP ENVKGTALSW VNEGLKPRSL TRDNSWGIPA
PFPGAEGKTI YVWFEALLGY LSATLEYFQG RGETERWKEF WENGKVRSYY FIGKDNIPFH
AVILPAMLLA SEKNYALPTV IAATEYLMYE GQKFSKSRKI GIWIDEAPLI MEVDYWRFLL
IRMRPEEKDM NFTWTEAIRI VNSELNDDVG NLVNRVITMV NRYFQGKIPE PKNLKEVDMR
LLSRVGETLD QVSFMFEKGK LKGGTELVLT LARETNAYLN EKAPWDKVKS DVEDASNTLF
VASSAIRAIA LMLYPVIPEK AKLIYDQLGL DITQERWDNA KEPLKPGHVV GKPAPVFKKL
PQDFEKNLNE ILEKVRKEVE KRRPTLLK
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