| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1912 |
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| Symbol | |
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| ID | 5103299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1858137 |
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| End bp | 1859060 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507800 |
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| Product | DNA primase large subunit |
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| Protein accession | YP_001191976 |
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| Protein GI | 146304660 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2219] Eukaryotic-type DNA primase, large subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.424658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTGCTTG ACTACAACAA GTATCCCTTC ATGGTCTCTG TTGACGAGGT AATCAAGAGA
GAGAACGCTG TCGACCTTTA CACCCTACTC ACCACTGATG GAAAGGCTAT CAGGGAGGCA
AAGAACAGGA TAAGGGAGAT AGTCACAGGC AAGGAGGTTA AGAGGCTCAA GGAGTACACC
TCTCCCCAGC TGGTGTTCTT CGCGGAGCTC CTCATCCTGG GAGTCCTGAA TGACAAGAGA
ACCACGGAGA GAGTCCTTAG AAAGGAAAAG GATCTATTCA TGAGGGACCT TGAAAGGGAG
GAGGACGCAG ACCTCCTCAC CGTGTTCAAG TGGCTAGGGT TCAACGTTAA AATGAGTAGC
CTAAAGTATC ACGAGGTAAC AAGGGGAAAG GTTCAGCCCA AGAGACTAGA CTATTCTCTC
CACTTTCTGG AGTACCTCAA GGCGATAAAG GGGAGCAAGG AGTTCCCCCT GACGCAGAGG
ATACTCCACA AGGGATACGT CTACATGGAT AGATCAACTC TCCTCAAATT GCTAGGTTTC
AATCTCTTGA AAAGGTTAAG GGAAACTGTG AAACCAATCC CCATGGAGGA AGTTCCAGAG
ACGCTCGTGG ACATCATAAT GATGAGAGGA GGGAAGACGC CCCCGTGCAT AAGGGCAATC
CAGGAGAAGA GGGAAAGATC ACGGGAGGAG GCCCTCGCCC TGGCAGTTTA CATGGCCAAC
ACGGGTTCCA GCGTGGACTC AATAGCCCTA GTCCTGGAGA AGAATGGGGA GGAGAATCCC
ATGGAACAGG TTAAGAGGAT CTTCAAGGAG AAAATGGTGA TTTACTCCTG TCAGAGAATG
AAAGAGTTGG GCATGTGCGT TTCAGACTGC GGGACTAGAT CTCCTCTTCA GTTTTATTAC
GGTAGCGCAG ACATCACCAA GTGA
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| Protein sequence | MVLDYNKYPF MVSVDEVIKR ENAVDLYTLL TTDGKAIREA KNRIREIVTG KEVKRLKEYT
SPQLVFFAEL LILGVLNDKR TTERVLRKEK DLFMRDLERE EDADLLTVFK WLGFNVKMSS
LKYHEVTRGK VQPKRLDYSL HFLEYLKAIK GSKEFPLTQR ILHKGYVYMD RSTLLKLLGF
NLLKRLRETV KPIPMEEVPE TLVDIIMMRG GKTPPCIRAI QEKRERSREE ALALAVYMAN
TGSSVDSIAL VLEKNGEENP MEQVKRIFKE KMVIYSCQRM KELGMCVSDC GTRSPLQFYY
GSADITK
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