Gene Msed_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1911 
Symbol 
ID5103298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1857589 
End bp1858164 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content50% 
IMG OID640507799 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001191975 
Protein GI146304659 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.608866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACAA ATCTAAGGAG CGCCTCCAAG AAGGTTTTGA GGCCAATGGC ATCTGCCCTG 
GTGAAGGCAG GTTTCACGGG AAATCAAGTC ACTGCTTTGG GGTTGGTCAT GTCCCTAGTA
TACTTGGGAG TAATCTATTT CACTAGGAAT CCCCTGCTCG GACTGTTGAC CCTGGCAATA
TCCTCCCTTT TAGATGCATT GGATGGGGAA GTTGCCAGGA TGAGGGGTCT TGCAGGACCT
AAGGGTAGCT TTCTTGACTC CTCCTTTGAC CGGCTTGAGG ATACCCTTTT CATTGGGTCT
CTGGTCCTGC TGGGGTTTCC TCCACTGTTG ACCGCAATAC TTGTTGGGAT TTCCCTATCA
ATCTCCTACT TGAGGGCTAA GGCAGAGTCC CTTGGAATAA AGGCAGAGGG TAAGGGACTC
ATTGAGAGGG GGGAGAGGTT AATCCTGGTG GGGCTAATAC TCCTCTTCCT TCCTTTCCTT
CCACTGATCT CCACCGTGAT CTTCTACGGG CTGTTTGTGG CGTCCATAAT AACCCTGGGG
CAGAGATTTC ACTTGGTGAT GTCTGCGCTA CCGTAA
 
Protein sequence
MITNLRSASK KVLRPMASAL VKAGFTGNQV TALGLVMSLV YLGVIYFTRN PLLGLLTLAI 
SSLLDALDGE VARMRGLAGP KGSFLDSSFD RLEDTLFIGS LVLLGFPPLL TAILVGISLS
ISYLRAKAES LGIKAEGKGL IERGERLILV GLILLFLPFL PLISTVIFYG LFVASIITLG
QRFHLVMSAL P