| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1907 |
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| Symbol | |
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| ID | 5104195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1853580 |
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| End bp | 1856213 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507795 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001191971 |
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| Protein GI | 146304655 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.488214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATAA TGGCCAGACA GCTTACCCTT GCTGACTTCT CTGGGATCAA GAGAGAGGAA
CCAGTTAAAC AGGAAGAGAA GACGCAGGAG GAAGAGAGGC CTCTGGAAAG GCCAGCGAGG
CTAAGAAAGG ACACAGTTAA ACAGGCGCAG GAGGAGAGAA AGTACTTTCT TCTCTCCGTA
GACTATGATG GTAAAATGGG GAAGGCTGTC TGCAAGCTTT ATGATCCTGA AACGGGTGAG
CTACACGTCC TTTACGACAG CACGGGTCAC AAGTCATACT TCCTTGTGGA TTTAGAGCCA
GATCAGATCC AAAAAATTCC AAAGATTGTT AAGGATGAGT CCTTTGTTAG GCTTGAGAAG
ACCACTAAAA TAGACCCCTA CACTTGGAAA CCTATTAACC TAACCAAGAT TGTGGTGAAT
GACCCCCTCG CTGTGAGACG CCTAAGAGAA TATGTCCCAA GGGCCTATGA AGCTCATATA
AAATATTTTA ACAATTATAT TTACGATTTC AGCCTCATAC CAGGGATGCC CTACGTGGTA
AAGAAGGGGA AGCTAGTCCC CCTTAAGCCG GAGGTTGACG TCAAAGAGGT AAAGGAAGCG
TTCAAGGATG CTGACCAGAT AGCTCAAGAG ATGGCGCTAG ACTGGGCTCC CCTCTTTGAG
TCCGAGATTC CGTCGGTGAA GAGGGTCGCA ATAGATATAG AGGTTTATAC TCCCATGATG
GGTAGGGTAC CGGATCCAGT AAAGGCCGAG TACCCCGTGA TAAGCGTAGC CCTAGCAGGG
AGCGATGGCC TGAAACTGGT CCTAGTCCTT GATAGGGGAG ATAGTCCGAT TCAAAGTAAG
GATATCAAGG TTGAGGTCTT CCGCACAGAG AGGGAGCTTC TCTCCAGGTT GTTTGACATT
CTTAAGGAAT ATCCCATGGT TCTGACCTTT AACGGAGACG ACTTCGATAT CCCATACCTG
ATCTTCAGAG GTTTCAAGCT CGGGTTACTA CAGGATGAGA TACCCTTCGA GATCTCTAGT
TTTGGCAGGA AACCTGACGC GAAGTTCAGA TATGGATTTC ACATAGATTT GTACAGGTTC
TTCTTCAACA AGGCGGTCAG GAACTATGCA TTTGAGGGGA AGTACTCAGA GTACAACCTT
GACACCGTAG CCCAGGCACT CTTGGGTCTC TCCAAGGTCA AGTTGGACGA GTCCATTAGC
GACCTAAACA TGTCTAAACT CGTGGAGTAC AACTACAGGG ACTCGGAGAT CACGCTGAAG
TTGACCACGT TCAACAACGA ACTAGTATGG AAGTTGATTG TACTCTTCTC CAGAATTTCC
AAGCTTGGTA TAGAGGAGCT AACTAGGACA GAGATATCAG CCTGGGTAAA GAACCTGTAC
TACTGGGAAC ATAGGAAAAG GAACTGGTTA ATCCCCCTCA AGGAGGAAAT CCTTGAACGC
TCCTCTGGGT TGAAGACAGC TGCCATTATC AAGGGAAAGG GATACAAGGG CGCAGTGGTC
ATAGACCCAC CTGTGGGGGT TTACTTTGAC GTAGTTGTTC TGGACTTCGC CTCACTGTAT
CCCTCCATCA TCAGGAACTG GAACCTCAGT TATGAAACCG TTGATGTGAA GGAATGTAAC
AAGAAAAGGG ATATAAGGGA TGAGAGTGGG GCGAAAATCC ATGAGGTGTG CGTGGACAGG
CCCGGGATTA CTGCAGTGGT AACTGGCTTA CTTAGGGACT TCAGGGTCAA AATTTACAAG
AAGAAAGGGA AACAGAGCAA CATAGACGAG GAGAGAAAGA TGTTGTACGA CGTGGTACAG
AGGGGCATGA AGGTGTTCAT TAATGCGACC TATGGCGTCT TCGGTGCGGA GACCTTCCCC
TTGTACGCCC CAGCAGTTGC AGAGAGCGTT ACAGCCCTAG GTAGGTACGT AATCACGTCC
ACCAAGGAAA TGGCTAACAA GCTTGGGCTG AAGGTTGTGT ACGGGGATAC GGACTCGCTC
TTCATTCACC AGCCTGATAA GAAGAAGCTG GAGGAACTGG TGGAGTGGAC CAGGCAGAAC
TTCGGGCTTG ATCTAGAGGT GGACAAAACT TACAGGTTCA TTGCCTTCTC CGGTCTTAAG
AAGAACTACT TCGGTGTGTT CAAGGATTCC AAGGTTGACA TAAAGGGCAT GTTGGCAAAG
AAGAGGAACA CCCCAGAGTT TCTGAAGCAG GCCTTCAATG AGGCTAAGGA GAGGCTAGCG
AAGGTTCAGA ACCAGGAGGA GCTCGAAAAG GCAATTCAAG ACTTAACGGC GCAGGTTAAG
GAGGTGTACA GGAAGCTTAA GATGAAGGAA TATAACTTGG ATGAGCTCGC CTTCAGGGTC
ATGTTATCCA GGGACGTGAA GTCCTATGAG AAGAACACCC CACAGCACGT TAAGGCTGCG
GCACAGCTGG CGGAGATGAA CGTACAAGTG ATGTCAAGGG ATATAATTAG CTTCGTAAAG
GTAAAGACTA AGGAGGGAGT TAAACCTGTC CAGCTAGCTA AGCTTTCAGA GATTGATGTG
GATAAATACT ATGAGAGCGT GAGAAGTACC TTCGAACAGT TATTGAAAAG CTTCAATGTG
AGCTGGGATA GAATAGAGTC CACGACATCA ATCGACTCGT TCTTCAAGAC TTAG
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| Protein sequence | MSIMARQLTL ADFSGIKREE PVKQEEKTQE EERPLERPAR LRKDTVKQAQ EERKYFLLSV
DYDGKMGKAV CKLYDPETGE LHVLYDSTGH KSYFLVDLEP DQIQKIPKIV KDESFVRLEK
TTKIDPYTWK PINLTKIVVN DPLAVRRLRE YVPRAYEAHI KYFNNYIYDF SLIPGMPYVV
KKGKLVPLKP EVDVKEVKEA FKDADQIAQE MALDWAPLFE SEIPSVKRVA IDIEVYTPMM
GRVPDPVKAE YPVISVALAG SDGLKLVLVL DRGDSPIQSK DIKVEVFRTE RELLSRLFDI
LKEYPMVLTF NGDDFDIPYL IFRGFKLGLL QDEIPFEISS FGRKPDAKFR YGFHIDLYRF
FFNKAVRNYA FEGKYSEYNL DTVAQALLGL SKVKLDESIS DLNMSKLVEY NYRDSEITLK
LTTFNNELVW KLIVLFSRIS KLGIEELTRT EISAWVKNLY YWEHRKRNWL IPLKEEILER
SSGLKTAAII KGKGYKGAVV IDPPVGVYFD VVVLDFASLY PSIIRNWNLS YETVDVKECN
KKRDIRDESG AKIHEVCVDR PGITAVVTGL LRDFRVKIYK KKGKQSNIDE ERKMLYDVVQ
RGMKVFINAT YGVFGAETFP LYAPAVAESV TALGRYVITS TKEMANKLGL KVVYGDTDSL
FIHQPDKKKL EELVEWTRQN FGLDLEVDKT YRFIAFSGLK KNYFGVFKDS KVDIKGMLAK
KRNTPEFLKQ AFNEAKERLA KVQNQEELEK AIQDLTAQVK EVYRKLKMKE YNLDELAFRV
MLSRDVKSYE KNTPQHVKAA AQLAEMNVQV MSRDIISFVK VKTKEGVKPV QLAKLSEIDV
DKYYESVRST FEQLLKSFNV SWDRIESTTS IDSFFKT
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