| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1902 |
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| Symbol | |
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| ID | 5103289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1844074 |
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| End bp | 1847532 |
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| Gene Length | 3459 bp |
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| Protein Length | 1152 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507789 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001191966 |
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| Protein GI | 146304650 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.165011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0801476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGGTA TTTACCTCTT GGTAGCTTCA CTCGTGCTCT CCTCCCTCGT GTTTTTCATC
AAGGACAAGA AGTCCTCTAC AACTCTCACG GGAATAGCGA TAGCGCTCAA CGGCTATTTC
CTGTTCAGGA GGGGACTATT TGAGAACTTC TTCGTGGCCA AGACCATTGG CTCCTTTGGA
TTGACGGTGA CGGATCTGAA CTTCCCCTTC GTGATTACCA TACTTGCGGT AACCCTGCTC
ACCATACCCT ACTCCTTGAG GTATATGGAG GAAAGATTCC ACGAACTTGG TTCAGGAAAC
TGGGGTCTTT TCTTCGGGCT CTACTCTCTG TTCTCCGTCT CAATGCTCTA CACTGTGTTG
TCCACTAACC TCTTAGAAAT TTACATTTTC CTGGAGATAG CCCTCGTGAC GTCCTTCCTC
CTCATCATGC TCTACGGATA TGGAGACAGG AGGAGAATAA GCCTGCTTTA CTTCATTTGG
ACCCACGTGG GTACGGTGCT TTTGCTCGCG TCGGTGATAG TGATAGGCCT AGAGACCGGT
AGCATGGACG TTTACTCCGC GTTGAACGTG TTTCACGATT ACTCTACCGT GGGGTACGCC
GTTGCCATCT TCCTCCTTGC GGTTATAGGA ATGATGGTGA AGGGAGCTCA GGCTGGAGTT
AACGTGTGGT TACCATATGC CCACGGCGAG GCTCCAACTC CCATTTCCGT GTTACTTAGT
CCCAACATGG TGGGACTTGG CGTCTTCGTG GTTATCCTTT ACTTCTACAT GTTCCCCGGG
ATGTCGTTCC TTGCCCCAAT CTTCGTGGGT TGGGCCTTAC TCACCATGAT TTACGGTGGA
ATTAATGCGT TGGCTCAAAG GGACTTCAAG AGGTTCCTGG CGTACTCAAG CGTCTCGCAA
ATGGGTTACA TGATGCTGGG GGCGGGAGTT GCGTTCCTGA TGGGGTTACC CCTGACCTTA
GTTTCGCTCC CACTTGGGAT AATTGCCTCA GCGTTGATTT ACGTATCCCA CGGCTTCGGA
AAGGCTCTCC TCTTCATGAG CGCTGGGGCT AACATAACTG AGGCCCACGA GAGGGATATA
GAGAAGTTGG GAGGACTGTA CCAGACCTCT CCCCTTCATA CTACTCTTTC ATTCCTGGGA
CTACTGAACA TACTTGGTCT TCCTCCTACT GTAGGGCTTA TCAGCGAAGT CCTTCTCCTG
TTTGCGACTG GAGAACTGGT GCAGAAGGTG GGTATATCCT GGTTCTTGGT AGTCGTGGTG
GCGTTGTTCA TTGCAATTGG GCTCTCCTCA GCTTACGCCA CCTATCTCTT TAAGAAGGTC
TACGCTGGGA AACCCCAAAA TCCAGTTTCG CTGGACAAGA TAGCGGAGTA TAGCGTACCC
ATGCTCATCT TGGCGGGGCT TAGCGTTGTC CTCTTCTTCT TCCCTCAAGT CAGTGTGGAG
TCCCTAGTTA ACTTTATCCA GTCCGTGTCA GGACAGGACA TCTACCTACC GCTAATAGTT
TTCCTTCCAG CTTTGGGTTC GCTTCTAGCC CTTATCACCA CGTCCAAGTT AAGCAGAGAT
GTGAGGGGAT GGATTGTTAA CATCATGTTA GGTATTAGCA TGATCCTAGC CTGGTTAAAC
CTTGGGTCCA CCTTGCTGGT TAATAGGACC TTCTTCGTTC CATCACAATT TTACACCATG
TTTGGTTACC TTTCCTTTAG CTCCTCACTC CTTCAGTCAA TACTGGCAGT TTTCGTGTCT
ACTCTGTCGT TCTTCATTGG TATTTACAGT GTCGGATACA TGAGAGAGGA TAACGTGTTA
AGGAGATATT GGGGGTTCTT CGGATTCTTC GTGAGCTCCA TGCTCGCTGT GGTTCTTTCC
AATAATATTC TCCTCTTCAT GGCCGGTTGG GAGGGTACTA GTCTTGCGTC CTACGGTCTA
ATTAGTTACT GGCTTGATGA CAACGAGAAG AACGTGGTAG GTGATAAGGG TAGGTTTGTG
TTCAACATGG AGTTCCTTTC GAAGCCTACA ACCTCTGGAA TCAGGGCAAT GATATTCACG
AGGGTAGGCG ATGTGGGCCT CCTACTTGGC CTTGGGTATC TGGTGTATTT AACCTCGACC
TCCACGCTCA CTGGATCCAC CATGCTCTTT ACGCAAGTTG GATCCCTGCC AGGTGTTTTC
CAGGTACTCG GTGAGATGGC GACCCTCCCC TTCGGGTTGA CTATGCTGAT TCTACTTTTC
CTGGGAGGCC TCTCAAAGAG CGCCCAGTTC CCCTTCACTC AATGGTTGGT GACAGCCATG
ACAGGTCCAA CGCCTGTTAG TGCCTTAATC CACGCGGCCA CCATGGTCAA TCTAGGGGCG
ATGTTCACAT TCCTTACCTA TCCTTACCTT GCGTTCCAAG CTAACAGTCA AGACGTGGGA
ACTCTTCTCA CTTTCTTCTC GGTAATGGCA GGGATTTCCC TGTTCACAGC CCTTTACACC
AGCCTCAATG CCCTGGTGTC AAACGAGCAG AAAGTAGTTC TAGCCAACTC AACTGCGGAT
CAGATATCAC TCATGATTTT CGCGTCCTCC ATGGGAGGTG TGCTAGCCAT CCTGGATGGT
AACCTCATTC TCCTGTTCTC TGGGATAGCA ATTGGGTTAA TCCAGATGAT AGCTCATGGT
ATCTACAAGG CAAGCCTGTT CATGAACGCT GGTAGCGTGA TCCATTACAC GGAATCGAGA
TACATGGGCA CGGTATCAGG ACTATACAGG GAATTAAAGT GGGTCTTTAT TCTTCAGCTA
ATAGCTGCCC TCAACCTCGC TAACGTGCCT CCTCTAGTGG GTTTCTGGGC TCACTCCTAT
ATCTCAACCC TAACCTCGGC AAGCGCTCCG CTAAACACGT TCTATCTCTT CCTGGAGTTT
CTGGGAGCAA TATATATTGT AAGGTACGTG ATGAAAACCT TCCTGTGGAA GGGAGAGACC
CACGAAGAGG AGAAGGGACA TGTTTACCCA GAGATGCTTA TATCTCCCAC TATCCTAGTG
CTGGCGTCTA TTGGCTTGGG TGCTTCAATC TCCCTCCTAT CAGGGTTTAT GGCATCTCAC
TTCTTCGCGG TAGGATTTGG CTTCGATTTT GTAGAGTTGG GACTTTCCCT TGTCGGTATA
GTCATCGCGG TCGCGTTGTA TCTTTCACCT AGGGACTTTG CCAGATATGC GGGATTAAGG
CCTCTCATTA ACTTCCTCTA CTATGGATGG TACATCTACC CTGCCCTAGA TAGGTTGGGC
GTCTCGTTGT ACAGGGGTGC ATTGGCCACA TATAGGGCCC TCGAGTATGG AACAATCGAC
ATGGGACTTA ATGTGAAGCT TCCGTCAGTC CTGATATCTG CTGGCAACAA GTACTTCAAG
GACATTCAGA CTGGGTTACT CAGGGATTAC GTCGGACTTT ACGTGGGTGG GTTGATCCTC
TTGATGGTCA TAGTCCTACT TGTGTTCGGG GTGATCTAA
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| Protein sequence | MLGIYLLVAS LVLSSLVFFI KDKKSSTTLT GIAIALNGYF LFRRGLFENF FVAKTIGSFG
LTVTDLNFPF VITILAVTLL TIPYSLRYME ERFHELGSGN WGLFFGLYSL FSVSMLYTVL
STNLLEIYIF LEIALVTSFL LIMLYGYGDR RRISLLYFIW THVGTVLLLA SVIVIGLETG
SMDVYSALNV FHDYSTVGYA VAIFLLAVIG MMVKGAQAGV NVWLPYAHGE APTPISVLLS
PNMVGLGVFV VILYFYMFPG MSFLAPIFVG WALLTMIYGG INALAQRDFK RFLAYSSVSQ
MGYMMLGAGV AFLMGLPLTL VSLPLGIIAS ALIYVSHGFG KALLFMSAGA NITEAHERDI
EKLGGLYQTS PLHTTLSFLG LLNILGLPPT VGLISEVLLL FATGELVQKV GISWFLVVVV
ALFIAIGLSS AYATYLFKKV YAGKPQNPVS LDKIAEYSVP MLILAGLSVV LFFFPQVSVE
SLVNFIQSVS GQDIYLPLIV FLPALGSLLA LITTSKLSRD VRGWIVNIML GISMILAWLN
LGSTLLVNRT FFVPSQFYTM FGYLSFSSSL LQSILAVFVS TLSFFIGIYS VGYMREDNVL
RRYWGFFGFF VSSMLAVVLS NNILLFMAGW EGTSLASYGL ISYWLDDNEK NVVGDKGRFV
FNMEFLSKPT TSGIRAMIFT RVGDVGLLLG LGYLVYLTST STLTGSTMLF TQVGSLPGVF
QVLGEMATLP FGLTMLILLF LGGLSKSAQF PFTQWLVTAM TGPTPVSALI HAATMVNLGA
MFTFLTYPYL AFQANSQDVG TLLTFFSVMA GISLFTALYT SLNALVSNEQ KVVLANSTAD
QISLMIFASS MGGVLAILDG NLILLFSGIA IGLIQMIAHG IYKASLFMNA GSVIHYTESR
YMGTVSGLYR ELKWVFILQL IAALNLANVP PLVGFWAHSY ISTLTSASAP LNTFYLFLEF
LGAIYIVRYV MKTFLWKGET HEEEKGHVYP EMLISPTILV LASIGLGASI SLLSGFMASH
FFAVGFGFDF VELGLSLVGI VIAVALYLSP RDFARYAGLR PLINFLYYGW YIYPALDRLG
VSLYRGALAT YRALEYGTID MGLNVKLPSV LISAGNKYFK DIQTGLLRDY VGLYVGGLIL
LMVIVLLVFG VI
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