| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1897 |
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| Symbol | |
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| ID | 5103284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1840528 |
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| End bp | 1841745 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507784 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_001191961 |
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| Protein GI | 146304645 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.412503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.283556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAAGTC AAGTTGATGA TTTAATGAAA AGTGGCGGGA TGGAGCTGGA CATAGTCCCC
GTCACTGGAG AACTCAATGT GGGGCCTCAA CATCCAGGAT CAGGGCACAT GAGAATTTTC
GTTAAGCTCA ATGGAGATAT TATAGAGGAC GCGGAAATTG ACCCTGGGTA CGTGCACAGG
GCTGTTGAGA AACTGGGAGA GAACAGGAAC TACATTCATT TGATCCCGCT CGTGGAAAGG
CCTGCAATCC TTGATTCAGT TAATATGAAC CTTGGATACA TCCTCGCGGT CGAGAAGATA
CTTAACGTTG ACGTTCCGGA GAGGGCACAA TACCTGAGGA GCTTTGCCGC AGAGATAAGC
AGGATAGCAA GTCACCTGTA CGGCATGGGT ATCCTGGCCA TCTTCATTGG GCATTCCACA
GGTTTCATGT GGGGGTTCGG CGATAGGGAA GTTTGGGTTC AGATTCTTGA GGCGCTGACG
GGTGCAAGGA TAACTAACTC CTACATCCTT CCAGGGGGAG TCAGAAGGGA TCTGACCCCA
GCCGTCATAG AGATGACCAA GAAGGCCATT GCATACCAAC GTAAGAAGAT GAAGGATTGG
GAGAGGATTT TCCTAAATAA CCCCAACATT AAGGCAAGGT TACAGGACGT TGGTGTTATG
ACACGGGAAC AGGCTATTGA GTGGGGAGCT GCTGGACCAA ACCTCAGAGG CTCTGGGGTT
TACTACGACG CTAGAAAGGC CGAGCCCTAT GGCGCTTATT CCAAGCTAGA CTTTGAAATA
CCGGTTTATA AGGAAGGAGA TGGTTACGCA AGGACCCTGG TCAGGTTTGA GGAAATTGAA
CAGAGCCTGA GAATACTGGA GCAGGTGATA AAGGATATTC CTGAAGGACA AATCCTGAGC
GATAGGTTCT TCAAGCAAAT TCCGCCCACC AGGTTGAAAA AGTGGTGGGA AGGACAAAAG
AGGATCGTTA TGCCAGGTTA TTACGCCTCC TTCAGGCCGC CTAAGGGTGA GGCGATTTCA
AGGGTTGAGG CAGGGAGAGG CGAACTCGTG TATTACGTGG TGAGCGACGG CTCAGCTAAA
CCCTATAGGT TGAGGATGAT AACTCCGTCA TACAGGTCAA TATACGTGAT GAAGAATCTC
CTGAAAGGGG CTAGATACGC GGATCTGGTC TCGATTTACG GTAGCCTAGA CTATTTCCCA
CCGGAGGCTG ATAGATAA
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| Protein sequence | MTSQVDDLMK SGGMELDIVP VTGELNVGPQ HPGSGHMRIF VKLNGDIIED AEIDPGYVHR
AVEKLGENRN YIHLIPLVER PAILDSVNMN LGYILAVEKI LNVDVPERAQ YLRSFAAEIS
RIASHLYGMG ILAIFIGHST GFMWGFGDRE VWVQILEALT GARITNSYIL PGGVRRDLTP
AVIEMTKKAI AYQRKKMKDW ERIFLNNPNI KARLQDVGVM TREQAIEWGA AGPNLRGSGV
YYDARKAEPY GAYSKLDFEI PVYKEGDGYA RTLVRFEEIE QSLRILEQVI KDIPEGQILS
DRFFKQIPPT RLKKWWEGQK RIVMPGYYAS FRPPKGEAIS RVEAGRGELV YYVVSDGSAK
PYRLRMITPS YRSIYVMKNL LKGARYADLV SIYGSLDYFP PEADR
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