| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1894 |
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| Symbol | |
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| ID | 5103281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1838813 |
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| End bp | 1839577 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507781 |
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| Product | thymidylate synthase, flavin-dependent |
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| Protein accession | YP_001191958 |
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| Protein GI | 146304642 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.68416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAGTA GGGCCCTTCC ATTTAAAGTA AGGTTGGTGG CGTACAACCC ACAGGGAGAG
AAAGTTGTTG CGATAGCAGC TAAAATGAGC AGGTCGAGAC ACGGCTGGGA GCACCACGAG
GACATGTCTC AAGAGGAGAT TGAAACGTGG ATTCGTGATT CAATCATCCA CGGATACTGG
TCAGTTCTGG AGCACTCGGT CTACACTTTC TCCATAGAGG GCATATCTAG GGTAGCCTCA
CACCAATTTG TGAGGCATAG GATAGCATCC TACACCCAGA TGTCGCATCG TTTCGCTAAG
CCAAAGGACG AATTCTATAG GCCCGTTGTA CCACCTAGCT TCAAGTCACC CGAGGCATTC
GAAAAGGTAT ACCAGGAGTA CCTTCGTGTC CTAGAGTCGG GGGTACCTGA GGAAGACGCT
AGGTATGTCC TACCAAACGG CGTCAACACT AACCTAGTGG TTACGATGAA CGCAAGGGAG
CTCTACAACT TCTTTGGACT CAGGTTATGT ACTAGGGCAC AGTGGGAGAT TAGGGCAGTG
GCCTGGCTCA TGCTGGACGA GGTGAAGAAG GTCCACCCCC TGCTCTTTAA GTTCGCAGGG
CCCAATTGCA TTCTTCACGA AAACTTCGTG AGGCCTGAGG ACGATCCCGT TACCCTTGAC
CAGGAGAAGG AGCTGGTCTC ATCGAGATGC ATCGAGGGAG TCCCGAGAAA CGGAGTCTGG
AAGTGTATAA GAAACTCTCG CATGATTCTA GAAAAAATAA AGTAA
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| Protein sequence | MISRALPFKV RLVAYNPQGE KVVAIAAKMS RSRHGWEHHE DMSQEEIETW IRDSIIHGYW
SVLEHSVYTF SIEGISRVAS HQFVRHRIAS YTQMSHRFAK PKDEFYRPVV PPSFKSPEAF
EKVYQEYLRV LESGVPEEDA RYVLPNGVNT NLVVTMNARE LYNFFGLRLC TRAQWEIRAV
AWLMLDEVKK VHPLLFKFAG PNCILHENFV RPEDDPVTLD QEKELVSSRC IEGVPRNGVW
KCIRNSRMIL EKIK
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