| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1885 |
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| Symbol | |
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| ID | 5104153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1828444 |
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| End bp | 1830384 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507771 |
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| Product | glutamate synthase (NADPH) GltB1 subunit / glutamate synthase (NADPH) GltB3 subunit |
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| Protein accession | YP_001191949 |
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| Protein GI | 146304633 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0067] Glutamate synthase domain 1
[COG0070] Glutamate synthase domain 3 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.273779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGC CATCGGGTTG TGGAGTTTTC GGGGTTCTGA GGAAACCACA CGCCCCTAAG
ATACAGGGAG ATTCCGTGGT AAGATCCATA GACGCTGTAA GCTATAGGGG AAGCGATAAG
GGGGCAGGGT TTGCTGTATT TAACCTGGAG GAGGGCAACT ACTACTACCT AAAGGCGTTC
TTCCTAGATG ACCCCGGAAA GATGAGGATA GCGATGGAGA GCCAAGGTCT TCAGGTGATA
GAGGAGAGCA TCGAGGCCGA GGATAGGGGG GTATGCAGTT GTAGCTATAA GGTTTCCATC
GGGAACATAG CCCAGTTAAG GAAGGCAGTG AGGAACCTCA ACGAGATGCT ATGGCCAGAG
AGGAAGGGTA GGATATACAG CATGGGTAAA TCCCTTCAGG TGTTCAAGGG AGTCGGCTAT
CCCAAGGATA TAGCCAAGAT ATATGACGTA AACAAGTACG AGGGAGATAT GTGGTTGGCC
CACACAAGAC AGCCAACCAA CTCCCCAGGT AGTTATCCCT ATTGGTCTCA CCCCTTCTCC
TCCTTTGATG TGGCCATCGT TCACAACGGT GACGTTAGCT CCTTCGGTGC CAACCTGGAG
TTCCTTCAAT CCAGGGGATG GGGAGGTTTC GTGGGGACGG ACAGTGAGGT CATGGCGTTC
CTCTTCGAGG AGTTGATCAG CGAAGGTCTC ACTGTGGAAG AAGTTGCAAA GATCCTGGTT
AATCCTTCCA GGAGGACCAG TGCCATATCC CCGCATCATG ATTACCTTTA TAGGAACGCG
AGACTCGATG GACCCTTCAC TGCGGTGATT GGGTATGACT CTGGGGATGA CCTATATCTT
GTGGGTTTGG CCGATAGATC CAAGTTCAGG CCTGTGTTGA TTGGCGAGGA CGATTACTAC
TACTATATTG CGAGCGAGGA AAGTCAGATA AGACTCATGA GTCGCGAGGC GAGAGTTTGG
ACCCTCAGCC CCGGATCTTA CTTCATTGCT TCCTTAAGGA AAGGGATACT TAGTCATGGG
AGAGAGCTAG AGGAGATAAG GAATTTCTCT CCTCCTCCTA CCTTTGTTTC CCCAAATTAT
GATATAGACG CTACTGCAAT TGGTTACAAA GACCTGGACA AGGAAATTCT TAGGACTGGG
AAGAAGGAGG TCAAGGTTGT AAACGTCCTG GGACACAGGT TCATTGGTAT AAAGTTTCCC
AGGGGAGGGC TTAAGGTCAG GTTATATGGG GTTGTGGGAA ACGCAATGGC TAACCTCAAC
GAGAACAACG AATTCTACGT TTACGGTAAC GTTGCAGACG ACTGTTGTGA CACCATGCAT
GGGGGAAAGG TGGTGATTAC CGGGGACGCA AGGGACGTTC TCGCGCAAAC TCTTCAGGGA
GGGAAAGTTT TCGTTGGCGG AAATGCGGGC AACAGGGTCG GCATACAGAT GCGTGAATAC
GCCAACAAGA GACCCTACCT GGTGATAGGT GGAAGGGTGG ATGACTATCT TGGGGAATAC
ATGGCAGGAG GGGTGATCAT GGTTCTTGGA ATGAGGGAGA AGGGTGAAAA AACGGGCAAC
TTCGTGGGAA CAGGAATGGT TGGGGGAAAG ATATACGTAC GTGGTAGGGT AGACCCTGGA
AGGATAGGGA TGCAACCCAA TAGGCTAGAG GTCATGAGAC TTCTAAAGGC ACTCGCCATG
GAGGGTTACG TGCACGACGT GGACTATAAC ATGTCATATA TTGACGTGAT GAAAAAATTG
GAGGGCGAAG CTAAGAAGTA CGCCAAGAGG CTTTTCGAGG AAAAGGTGGG AATACCGACT
TACGAGTACA GGGAGTTGAG TGACTCGGAG TTTAAGGAAG TTGAGCCTAT CATAAGGGAG
TACGATCAAG ATCTAGGTAC AAGAGCTACT GAACTTTTGA GCGAGAAATT CACCGTTATT
TACCCGTCCA AGGAGAAATA A
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| Protein sequence | MISPSGCGVF GVLRKPHAPK IQGDSVVRSI DAVSYRGSDK GAGFAVFNLE EGNYYYLKAF
FLDDPGKMRI AMESQGLQVI EESIEAEDRG VCSCSYKVSI GNIAQLRKAV RNLNEMLWPE
RKGRIYSMGK SLQVFKGVGY PKDIAKIYDV NKYEGDMWLA HTRQPTNSPG SYPYWSHPFS
SFDVAIVHNG DVSSFGANLE FLQSRGWGGF VGTDSEVMAF LFEELISEGL TVEEVAKILV
NPSRRTSAIS PHHDYLYRNA RLDGPFTAVI GYDSGDDLYL VGLADRSKFR PVLIGEDDYY
YYIASEESQI RLMSREARVW TLSPGSYFIA SLRKGILSHG RELEEIRNFS PPPTFVSPNY
DIDATAIGYK DLDKEILRTG KKEVKVVNVL GHRFIGIKFP RGGLKVRLYG VVGNAMANLN
ENNEFYVYGN VADDCCDTMH GGKVVITGDA RDVLAQTLQG GKVFVGGNAG NRVGIQMREY
ANKRPYLVIG GRVDDYLGEY MAGGVIMVLG MREKGEKTGN FVGTGMVGGK IYVRGRVDPG
RIGMQPNRLE VMRLLKALAM EGYVHDVDYN MSYIDVMKKL EGEAKKYAKR LFEEKVGIPT
YEYRELSDSE FKEVEPIIRE YDQDLGTRAT ELLSEKFTVI YPSKEK
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